Merge master into staging-next

14 files changed, 116 insertions, 37 deletions

diff --git a/pkgs/tools/admin/azure-cli/default.nix b/pkgs/tools/admin/azure-cli/default.nix
index 820fef1a74aa..dbd8de5fe55a 100644
--- a/pkgs/tools/admin/azure-cli/default.nix
+++ b/pkgs/tools/admin/azure-cli/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, lib, python, fetchFromGitHub, installShellFiles }:
+{ stdenv, lib, python3, fetchFromGitHub, installShellFiles }:
 
 let
   version = "2.14.2";
@@ -10,12 +10,14 @@ let
   };
 
   # put packages that needs to be overriden in the py package scope
-  py = import ./python-packages.nix { inherit stdenv python lib src version; };
+  py = import ./python-packages.nix {
+    inherit stdenv lib src version;
+    python = python3;
+  };
 in
 py.pkgs.toPythonApplication (py.pkgs.buildAzureCliPackage {
   pname = "azure-cli";
   inherit version src;
-  disabled = python.isPy27; # namespacing assumes PEP420, which isn't compat with py2
 
   sourceRoot = "source/src/azure-cli";
 
diff --git a/pkgs/tools/audio/abcm2ps/default.nix b/pkgs/tools/audio/abcm2ps/default.nix
index 099ccc6f4cb8..5088cdeb9609 100644
--- a/pkgs/tools/audio/abcm2ps/default.nix
+++ b/pkgs/tools/audio/abcm2ps/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   pname = "abcm2ps";
-  version = "8.14.9";
+  version = "8.14.10";
 
   src = fetchFromGitHub {
     owner = "leesavide";
     repo = "abcm2ps";
     rev = "v${version}";
-    sha256 = "0h4qzj9k5ng09nbkfipvr82piq68c576akjwmhsqn05rvgirmhx7";
+    sha256 = "0x20vmf94n9s4r2q45543yi39fkc0jg9wd1imihjcqmb2sz3x3vm";
   };
 
   configureFlags = [
diff --git a/pkgs/tools/audio/pasystray/default.nix b/pkgs/tools/audio/pasystray/default.nix
index 8b0580ba98c4..d80f1af4182a 100644
--- a/pkgs/tools/audio/pasystray/default.nix
+++ b/pkgs/tools/audio/pasystray/default.nix
@@ -1,5 +1,5 @@
-{ stdenv, fetchFromGitHub, pkgconfig, autoreconfHook, wrapGAppsHook
-, gnome3, avahi, gtk3, libappindicator-gtk3, libnotify, libpulseaudio
+{ stdenv, fetchpatch, fetchFromGitHub, pkgconfig, autoreconfHook, wrapGAppsHook
+, gnome3, avahi, gtk3, libayatana-appindicator-gtk3, libnotify, libpulseaudio
 , xlibsWrapper, gsettings-desktop-schemas
 }:
 
@@ -17,12 +17,18 @@ stdenv.mkDerivation rec {
   patches = [
     # https://github.com/christophgysin/pasystray/issues/90#issuecomment-306190701
     ./fix-wayland.patch
+
+    # https://github.com/christophgysin/pasystray/issues/98
+    (fetchpatch {
+      url = "https://sources.debian.org/data/main/p/pasystray/0.7.1-1/debian/patches/0001-Build-against-ayatana-appindicator.patch";
+      sha256 = "0hijphrf52n2zfwdnrmxlp3a7iwznnkb79awvpzplz0ia2lqywpw";
+    })
   ];
 
   nativeBuildInputs = [ pkgconfig autoreconfHook wrapGAppsHook ];
   buildInputs = [
     gnome3.adwaita-icon-theme
-    avahi gtk3 libappindicator-gtk3 libnotify libpulseaudio xlibsWrapper
+    avahi gtk3 libayatana-appindicator-gtk3 libnotify libpulseaudio xlibsWrapper
     gsettings-desktop-schemas
   ];
 
diff --git a/pkgs/tools/filesystems/irods/common.nix b/pkgs/tools/filesystems/irods/common.nix
index fb90c3b0aebb..dfa7530ac64f 100644
--- a/pkgs/tools/filesystems/irods/common.nix
+++ b/pkgs/tools/filesystems/irods/common.nix
@@ -51,6 +51,6 @@ with stdenv;
     homepage = "https://irods.org";
     license = stdenv.lib.licenses.bsd3;
     maintainers = [ stdenv.lib.maintainers.bzizou ];
-    platforms = stdenv.lib.platforms.all;
+    platforms = stdenv.lib.platforms.linux;
   };
 }
diff --git a/pkgs/tools/graphics/gmic/default.nix b/pkgs/tools/graphics/gmic/default.nix
index 6787ff2e8f8d..e8e9472cabdf 100644
--- a/pkgs/tools/graphics/gmic/default.nix
+++ b/pkgs/tools/graphics/gmic/default.nix
@@ -15,13 +15,13 @@
 
 stdenv.mkDerivation rec {
   pname = "gmic";
-  version = "2.9.3";
+  version = "2.9.4";
 
   outputs = [ "out" "lib" "dev" "man" ];
 
   src = fetchurl {
     url = "https://gmic.eu/files/source/gmic_${version}.tar.gz";
-    sha256 = "1pj3rwycwnspw2lm5j0w4647677y6s3446zsx9s6br9bc7v7w5s6";
+    sha256 = "1ixcdq16gmgh1brrb6mgdibypq9lvh8gnz86b5mmyxlnyi4fw2vr";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/tools/inputmethods/ibus/default.nix b/pkgs/tools/inputmethods/ibus/default.nix
index 238e133495c9..32db48503919 100644
--- a/pkgs/tools/inputmethods/ibus/default.nix
+++ b/pkgs/tools/inputmethods/ibus/default.nix
@@ -60,13 +60,13 @@ in
 
 stdenv.mkDerivation rec {
   pname = "ibus";
-  version = "1.5.22";
+  version = "1.5.23";
 
   src = fetchFromGitHub {
     owner = "ibus";
     repo = "ibus";
     rev = version;
-    sha256 = "09ynn7gq84q18hhbg6wq2yrliwil42qbzxbwbpggry1s955jg5xb";
+    sha256 = "0qnblqhz8wyhchnm36zrxhbvi9g4fcwcgmw7p60yjybdlhq4asc7";
   };
 
   patches = [
diff --git a/pkgs/tools/misc/broot/default.nix b/pkgs/tools/misc/broot/default.nix
index b46d6490c4c0..e5c528596b0d 100644
--- a/pkgs/tools/misc/broot/default.nix
+++ b/pkgs/tools/misc/broot/default.nix
@@ -11,14 +11,14 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "broot";
-  version = "1.0.5";
+  version = "1.0.6";
 
   src = fetchCrate {
     inherit pname version;
-    sha256 = "0b28xdc3dwhr4vb3w19fsrbj2m82zwkg44l4an3r4mi2vgb25nv2";
+    sha256 = "1yzj1k09yd3q2dff6a6m0xv2v6z681x25g0x5ak41lm5rn3hj8vl";
   };
 
-  cargoSha256 = "07gsga5hf4l64kyjadqvmbg5bay7mad9kg2pi4grjxdw6lsxky0f";
+  cargoSha256 = "1axcnr7bzplchpz4cdy5872fmrnzrs1p665c0vmxzs9bgnml5sl8";
 
   nativeBuildInputs = [
     makeWrapper
diff --git a/pkgs/tools/misc/goreleaser/default.nix b/pkgs/tools/misc/goreleaser/default.nix
index 652dce15c42a..95944d566df2 100644
--- a/pkgs/tools/misc/goreleaser/default.nix
+++ b/pkgs/tools/misc/goreleaser/default.nix
@@ -2,16 +2,16 @@
 
 buildGoModule rec {
   pname = "goreleaser";
-  version = "0.145.0";
+  version = "0.147.2";
 
   src = fetchFromGitHub {
     owner = "goreleaser";
     repo = pname;
     rev = "v${version}";
-    sha256 = "1w2mbyywr3zsn068cshkx502x0zrxrbrgaw23x4spfri0nk6v4fd";
+    sha256 = "1pzbwjqnb2l1845dqmx5s2xyxv7088yz2888bjwm0qs8pm1l6spi";
   };
 
-  vendorSha256 = "0drk58bhcvx75cd6s0xnyh6swph1vlvpzp2nngr7agvjdcrbady6";
+  vendorSha256 = "1qwggbgfvgx1anh55jx2lj0x59h5j3wixb8r2ylaynrrxx1b167w";
 
   buildFlagsArray = [
     "-ldflags="
diff --git a/pkgs/tools/misc/thin-provisioning-tools/default.nix b/pkgs/tools/misc/thin-provisioning-tools/default.nix
index 8df030eafadb..3eccb4883618 100644
--- a/pkgs/tools/misc/thin-provisioning-tools/default.nix
+++ b/pkgs/tools/misc/thin-provisioning-tools/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub, fetchpatch, autoreconfHook, expat, libaio, boost, binutils }:
+{ stdenv, fetchFromGitHub, autoreconfHook, expat, libaio, boost, binutils }:
 
 stdenv.mkDerivation rec {
   pname = "thin-provisioning-tools";
diff --git a/pkgs/tools/misc/ugtrain/default.nix b/pkgs/tools/misc/ugtrain/default.nix
new file mode 100644
index 000000000000..0645645ae2bf
--- /dev/null
+++ b/pkgs/tools/misc/ugtrain/default.nix
@@ -0,0 +1,28 @@
+{ stdenv
+, fetchFromGitHub
+, autoreconfHook
+, pkg-config
+, scanmem
+}:
+
+stdenv.mkDerivation rec {
+  version = "0.4.1";
+  pname = "ugtrain";
+
+  src = fetchFromGitHub {
+    owner  = "ugtrain";
+    repo   = "ugtrain";
+    rev    = "v${version}";
+    sha256 = "0pw9lm8y83mda7x39874ax2147818h1wcibi83pd2x4rp1hjbkkn";
+  };
+
+  nativeBuildInputs = [ autoreconfHook pkg-config scanmem ];
+
+  meta = with stdenv.lib; {
+    homepage = "https://github.com/ugtrain/ugtrain";
+    description = "The Universal Elite Game Trainer for CLI (Linux game trainer research project)";
+    maintainers = with maintainers; [ mtrsk ];
+    platforms = platforms.linux;
+    license = licenses.gpl3Only;
+  };
+}
diff --git a/pkgs/tools/nix/dnadd/default.nix b/pkgs/tools/nix/dnadd/default.nix
new file mode 100644
index 000000000000..eff99743f1e1
--- /dev/null
+++ b/pkgs/tools/nix/dnadd/default.nix
@@ -0,0 +1,22 @@
+{ stdenv, fetchFromGitHub }:
+
+stdenv.mkDerivation rec {
+  pname = "dnadd";
+  version = "1.0.0";
+
+  src = fetchFromGitHub {
+    owner = "JoeLancaster";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "1vzbgz8y9gj4lszsx4iczfbrj373sl4wi43j7rp46zfcbw323d4r";
+  };
+
+  makeFlags = [ "PREFIX=$(out)" ];
+
+  meta = with stdenv.lib; {
+    homepage = "https://github.com/joelancaster/dnadd";
+    description = "Adds packages declaratively on the command line";
+    license = licenses.gpl3Plus;
+    maintainers = with maintainers; [ joelancaster ];
+  };
+}
diff --git a/pkgs/tools/system/bottom/default.nix b/pkgs/tools/system/bottom/default.nix
index ac03bd4119fd..12367949e9e8 100644
--- a/pkgs/tools/system/bottom/default.nix
+++ b/pkgs/tools/system/bottom/default.nix
@@ -2,18 +2,18 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "bottom";
-  version = "0.5.1";
+  version = "0.5.3";
 
   src = fetchFromGitHub {
     owner = "ClementTsang";
     repo = pname;
     rev = version;
-    sha256 = "0bw83l3s7yraxiwbwcm0nfqqhv2dkd208qz7nm89whzdjzf340gj";
+    sha256 = "sha256-Gc2bL7KqDqab0hCCOi2rtEw+5r0bSETzTipLLdX/ipk=";
   };
 
   buildInputs = stdenv.lib.optional stdenv.hostPlatform.isDarwin darwin.apple_sdk.frameworks.IOKit;
 
-  cargoSha256 = "11ywms0vgrm4ildsgl99agjimk5f3l56hlr5aa70kagxam4k6vmn";
+  cargoSha256 = "sha256-Bdkq3cTuziTQ7/BkvuBHbfuxRIXnz4h2OadoAGNTBc0=";
 
   doCheck = false;
 
diff --git a/pkgs/tools/text/uwc/default.nix b/pkgs/tools/text/uwc/default.nix
new file mode 100644
index 000000000000..cf8e5658f764
--- /dev/null
+++ b/pkgs/tools/text/uwc/default.nix
@@ -0,0 +1,24 @@
+{ rustPlatform, lib, fetchFromGitLab }:
+
+rustPlatform.buildRustPackage rec {
+  pname = "uwc";
+  version = "1.0.4";
+
+  src = fetchFromGitLab {
+    owner = "dead10ck";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "1ywqq9hrrm3frvd2sswknxygjlxi195kcy7g7phwq63j7hkyrn50";
+  };
+
+  cargoSha256 = "0ra62cf75b1c4knxxpbdg8m0sy2k02r52j606fp5l9crp0fml8l0";
+
+  doCheck = true;
+
+  meta = with lib; {
+    description = "Like wc, but unicode-aware, and with per-line mode";
+    homepage = "https://gitlab.com/dead10ck/uwc";
+    license = licenses.mit;
+    maintainers = with maintainers; [ ShamrockLee ];
+  };
+}
diff --git a/pkgs/tools/typesetting/tex/nix/run-latex.sh b/pkgs/tools/typesetting/tex/nix/run-latex.sh
index 7a5767f9c063..3f8a16580ea5 100644
--- a/pkgs/tools/typesetting/tex/nix/run-latex.sh
+++ b/pkgs/tools/typesetting/tex/nix/run-latex.sh
@@ -41,7 +41,11 @@ showError() {
     exit 1
 }
 
+pass=0
+
 runLaTeX() {
+    ((pass=pass+1))
+    echo "PASS $pass..."
     if ! $latex $latexFlags $rootName >$tmpFile 2>&1; then showError; fi
     runNeeded=
     if fgrep -q \
@@ -51,6 +55,7 @@ runLaTeX() {
         "$tmpFile"; then
         runNeeded=1
     fi
+    echo
 }
 
 echo
@@ -61,10 +66,7 @@ if test -n "$copySources"; then
 fi
 
 
-echo "PASS 1..."
 runLaTeX
-echo
-
 
 for auxFile in $(find . -name "*.aux"); do
     # Run bibtex to process all bibliographies.  There may be several
@@ -89,11 +91,8 @@ for auxFile in $(find . -name "*.aux"); do
     fi
 done
 
-
 if test "$runNeeded"; then
-    echo "PASS 2..."
     runLaTeX
-    echo
 fi
 
 
@@ -105,20 +104,18 @@ if test -f $rootNameBase.idx; then
     makeindex $makeindexFlags $rootNameBase.idx
     runNeeded=1
     echo
-fi    
-
+fi
 
-if test "$runNeeded"; then
-    echo "PASS 3..."
+# We check that pass is less than 2 to catch situations where the document is
+# simple enough (no bibtex, etc.) so that it would otherwise require only one
+# pass but also contains a ToC.
+# In essence this check ensures that we do at least two passes on all documents.
+if test "$runNeeded" = 1 -o "$pass" -lt 2 ; then
     runLaTeX
-    echo
 fi
 
-
 if test "$runNeeded"; then
-    echo "PASS 4..."
     runLaTeX
-    echo
 fi