diff options
| author | Nathan Viets <nathan.g.viets@gmail.com> | 2023-03-02 19:37:27 -0500 |
|---|---|---|
| committer | Nathan Viets <nathan.g.viets@gmail.com> | 2023-03-07 18:23:26 +0100 |
| commit | 2f430da1c6aaeb4306427b77f139f53dcd729e08 (patch) | |
| tree | adbee68b51a283ba4beea0fc9176ddb7a75a824e /pkgs/development/r-modules | |
| parent | 022f8093322f2d5a291d219f272167003504ba64 (diff) | |
Replacing MRAN mirror with posit
Diffstat (limited to 'pkgs/development/r-modules')
| -rw-r--r-- | pkgs/development/r-modules/default.nix | 4 | ||||
| -rwxr-xr-x | pkgs/development/r-modules/generate-r-packages.R | 6 | ||||
| -rw-r--r-- | pkgs/development/r-modules/generate-shell.nix | 1 |
3 files changed, 7 insertions, 4 deletions
diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix index 7cfb8e54f275..6d6814e3f66a 100644 --- a/pkgs/development/r-modules/default.nix +++ b/pkgs/development/r-modules/default.nix @@ -68,9 +68,9 @@ let hydraPlatforms = []; }; deriveCran = mkDerive { - mkHomepage = {name, snapshot, ...}: "http://mran.revolutionanalytics.com/snapshot/${snapshot}/web/packages/${name}/"; + mkHomepage = {name, snapshot, ...}: "https://cran.r-project.org/${snapshot}/web/packages/${name}/"; mkUrls = {name, version, snapshot}: [ - "http://mran.revolutionanalytics.com/snapshot/${snapshot}/src/contrib/${name}_${version}.tar.gz" + "https://packagemanager.rstudio.com/cran/${snapshot}/src/contrib/${name}_${version}.tar.gz" ]; }; diff --git a/pkgs/development/r-modules/generate-r-packages.R b/pkgs/development/r-modules/generate-r-packages.R index 8c97c651e4c4..0b01c09a278e 100755 --- a/pkgs/development/r-modules/generate-r-packages.R +++ b/pkgs/development/r-modules/generate-r-packages.R @@ -1,5 +1,6 @@ #!/usr/bin/env Rscript library(data.table) +library(jsonlite) library(parallel) library(BiocManager) cl <- makeCluster(10) @@ -11,12 +12,13 @@ if ("release" %in% biocVersion$BiocStatus) { } else { biocVersion <- max(as.numeric(as.character(biocVersion$Bioc))) } -snapshotDate <- Sys.Date()-1 +dates <- stream_in(url("https://packagemanager.rstudio.com/__api__/repos/2/transaction-dates"), verbose = FALSE) +snapshotDate <- as.Date(dates[nrow(dates), "alias"]) mirrorUrls <- list( bioc=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/bioc/src/contrib/") , "bioc-annotation"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/data/annotation/src/contrib/") , "bioc-experiment"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/data/experiment/src/contrib/") - , cran=paste0("http://mran.revolutionanalytics.com/snapshot/", snapshotDate, "/src/contrib/") + , cran=paste0("https://packagemanager.rstudio.com/cran/", snapshotDate, "/src/contrib/") ) mirrorType <- commandArgs(trailingOnly=TRUE)[1] diff --git a/pkgs/development/r-modules/generate-shell.nix b/pkgs/development/r-modules/generate-shell.nix index 1c96cf05cb54..0ab3d6fb557f 100644 --- a/pkgs/development/r-modules/generate-shell.nix +++ b/pkgs/development/r-modules/generate-shell.nix @@ -15,6 +15,7 @@ stdenv.mkDerivation { (rWrapper.override { packages = with rPackages; [ data_table + jsonlite parallel BiocManager ]; |