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authorBen Darwin <bcdarwin@gmail.com>2017-09-26 13:22:46 -0400
committerBen Darwin <bcdarwin@gmail.com>2018-04-09 18:06:54 -0400
commitcf2aac6a045f97a20b79978693547ea83abc076a (patch)
treeae3b719252e2a8a883154900847e465d7e4c7982 /pkgs/applications/science
parente90d1e8631d62053b9f16343baececda9e92406f (diff)
address license/version issues for PR #29782
Diffstat (limited to 'pkgs/applications/science')
-rw-r--r--pkgs/applications/science/biology/N3/default.nix3
-rw-r--r--pkgs/applications/science/biology/inormalize/default.nix3
-rw-r--r--pkgs/applications/science/biology/minc-tools/default.nix3
-rw-r--r--pkgs/applications/science/biology/minc-widgets/default.nix3
-rw-r--r--pkgs/applications/science/biology/mni_autoreg/default.nix14
5 files changed, 16 insertions, 10 deletions
diff --git a/pkgs/applications/science/biology/N3/default.nix b/pkgs/applications/science/biology/N3/default.nix
index feaea5b15342..c14846beec2f 100644
--- a/pkgs/applications/science/biology/N3/default.nix
+++ b/pkgs/applications/science/biology/N3/default.nix
@@ -4,7 +4,7 @@
stdenv.mkDerivation rec {
pname = "N3";
- name = "${pname}-1.0.20";
+ name = "${pname}-2017-09-18";
src = fetchFromGitHub {
owner = "BIC-MNI";
@@ -33,5 +33,6 @@ stdenv.mkDerivation rec {
description = "MRI non-uniformity correction for MINC files";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.unix;
+ license = licenses.free;
};
}
diff --git a/pkgs/applications/science/biology/inormalize/default.nix b/pkgs/applications/science/biology/inormalize/default.nix
index d202db8521cf..f17143ad06bb 100644
--- a/pkgs/applications/science/biology/inormalize/default.nix
+++ b/pkgs/applications/science/biology/inormalize/default.nix
@@ -4,7 +4,7 @@
stdenv.mkDerivation rec {
pname = "inormalize";
- name = "${pname}-1.0.20";
+ name = "${pname}-2014-10-21";
src = fetchFromGitHub {
owner = "BIC-MNI";
@@ -34,5 +34,6 @@ stdenv.mkDerivation rec {
description = "Program to normalize intensity of MINC files";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.unix;
+ license = licenses.free;
};
}
diff --git a/pkgs/applications/science/biology/minc-tools/default.nix b/pkgs/applications/science/biology/minc-tools/default.nix
index 011db3f0fb86..8e1f74686d1f 100644
--- a/pkgs/applications/science/biology/minc-tools/default.nix
+++ b/pkgs/applications/science/biology/minc-tools/default.nix
@@ -2,7 +2,7 @@
stdenv.mkDerivation rec {
pname = "minc-tools";
- name = "${pname}-2.3.01";
+ name = "${pname}-2017-09-11";
src = fetchFromGitHub {
owner = "BIC-MNI";
@@ -32,5 +32,6 @@ stdenv.mkDerivation rec {
description = "Command-line utilities for working with MINC files";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.unix;
+ license = licenses.free;
};
}
diff --git a/pkgs/applications/science/biology/minc-widgets/default.nix b/pkgs/applications/science/biology/minc-widgets/default.nix
index 0474ad1bff07..9084dfb2e1c3 100644
--- a/pkgs/applications/science/biology/minc-widgets/default.nix
+++ b/pkgs/applications/science/biology/minc-widgets/default.nix
@@ -4,7 +4,7 @@
stdenv.mkDerivation rec {
pname = "minc-widgets";
- name = "${pname}-1.0.0";
+ name = "${pname}-2016-04-20";
src = fetchFromGitHub {
@@ -29,5 +29,6 @@ stdenv.mkDerivation rec {
description = "Collection of Perl and shell scripts for processing MINC files";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.unix;
+ license = licenses.free;
};
}
diff --git a/pkgs/applications/science/biology/mni_autoreg/default.nix b/pkgs/applications/science/biology/mni_autoreg/default.nix
index 5e7808918e99..076ecd03a1b1 100644
--- a/pkgs/applications/science/biology/mni_autoreg/default.nix
+++ b/pkgs/applications/science/biology/mni_autoreg/default.nix
@@ -1,13 +1,14 @@
-{ stdenv, fetchgit, cmake, makeWrapper, perl, GetoptTabular, MNI-Perllib, libminc }:
+{ stdenv, fetchFromGitHub, cmake, makeWrapper, perl, GetoptTabular, MNI-Perllib, libminc }:
stdenv.mkDerivation rec {
pname = "mni_autoreg";
- name = "${pname}-0.99.70";
+ name = "${pname}-2017-09-22";
- src = fetchgit {
- url = "https://github.com/BIC-MNI/${pname}.git";
- rev = "a4367b82012fe3b40e794fc1eb6c3c86e86148bf";
- sha256 = "1j5vk7hf03y38fwb5klfppk3g4d2hx1fg3ikph2708pnssmim2qr";
+ src = fetchFromGitHub {
+ owner = "BIC-MNI";
+ repo = pname;
+ rev = "ab99e29987dc029737785baebf24896ec37a2d76";
+ sha256 = "0axl069nv57vmb2wvqq7s9v3bfxwspzmk37bxm4973ai1irgppjq";
};
nativeBuildInputs = [ cmake makeWrapper ];
@@ -29,6 +30,7 @@ stdenv.mkDerivation rec {
description = "Tools for automated registration using the MINC image format";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.unix;
+ license = licenses.free;
};
}