diff options
author | Pjotr Prins <pjotr.public01@thebird.nl> | 2008-06-05 17:14:33 +0000 |
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committer | Pjotr Prins <pjotr.public01@thebird.nl> | 2008-06-05 17:14:33 +0000 |
commit | 62c917620641d54f5313d7be8c6251c00574fa04 (patch) | |
tree | 50f13116d765be64e6e4044d899a5d180dfc6941 /pkgs/applications/science | |
parent | 5866a8b101aa979890fcdbc5691ecd277a12220b (diff) |
Added emboss
svn path=/nixpkgs/trunk/; revision=11993
Diffstat (limited to 'pkgs/applications/science')
-rw-r--r-- | pkgs/applications/science/biology/emboss/default.nix | 30 |
1 files changed, 30 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/emboss/default.nix b/pkgs/applications/science/biology/emboss/default.nix new file mode 100644 index 000000000000..427eb0a432ec --- /dev/null +++ b/pkgs/applications/science/biology/emboss/default.nix @@ -0,0 +1,30 @@ +{stdenv, fetchurl, readline, perl, libX11, libpng, libXt, zlib}: + +stdenv.mkDerivation { + name = "emboss-5.0.0-9"; + src = fetchurl { + url = ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-5.0.0.tar.gz; + sha256 = "1bj0bxfj97cgnk3w3123cqn5sq5xsbvzs8bzvqkgy6d7hadz1rk4"; + }; + patch = fetchurl { + url = ftp://emboss.open-bio.org/pub/EMBOSS/fixes/patches/patch-1-9.gz; + sha256 = "1pfn5zdxrr71c3kwpdkzmmsqvdwkmynkvcr707vqh73h9cjhk3c1"; + }; + + buildInputs = [readline perl libpng libX11 libXt zlib]; + + preConfigure = '' + gzip -d $patch | patch -p1 + ''; + + meta = { + description = "EMBOSS is 'The European Molecular Biology Open Software Suite'"; + longDescription = ''EMBOSS is a free Open Source software analysis package + specially developed for the needs of the molecular biology (e.g. EMBnet) + user community. The software automatically copes with data in a variety of + formats and even allows transparent retrieval of sequence data from the + web.''; + license = "GPL2"; + homepage = http://emboss.sourceforge.net/; + }; +} |