summaryrefslogtreecommitdiffstats
path: root/pkgs/applications/science
diff options
context:
space:
mode:
authorPjotr Prins <pjotr.public01@thebird.nl>2008-10-07 14:35:11 +0000
committerPjotr Prins <pjotr.public01@thebird.nl>2008-10-07 14:35:11 +0000
commit4ab58fc7f33975b9640cc6de17cccf741b26488a (patch)
tree69bea1cdbc3393bc3e8b5b8109ca34efef815c3d /pkgs/applications/science
parenta4b6f1066cda791fe61843189ec4da1499be0900 (diff)
Squashed commit of the following:
commit 74c0e9192e17d9dfce50f811fdb7e82a2785134e Author: Pjotr <pjotr.public05@thebird.nl> Date: Tue Oct 7 16:33:39 2008 +0200 Merge commit ad91fb07a47226ed9e99f2dcb55b69ea0e70aa84 Author: Pjotr <pjotr.public05@thebird.nl> Date: Tue Oct 7 16:23:20 2008 +0200 openmotif: added some comments on license and download commit 68a552975f5c7e0964c7c9625e08de0864757255 Author: Pjotr <pjotr.public05@thebird.nl> Date: Tue Oct 7 16:10:49 2008 +0200 Match parameters so arb starts compiling against openmotif commit 16c52fb4071193f89acf6f7f53cfeff322285555 Author: Pjotr <pjotr.public05@thebird.nl> Date: Tue Oct 7 16:04:06 2008 +0200 Added openmotif package commit 75c4bba418f16859e99e97f48785e27ad87e99f5 Author: Pjotr <pjotr.public05@thebird.nl> Date: Tue Oct 7 15:20:55 2008 +0200 Adding openmotif commit 83a847d194b007e2ef856f2a5ad7c49939b6cf8c Merge: 52918f1... 5ba4f06... Author: Pjotr <pjotr.public05@thebird.nl> Date: Tue Oct 7 14:15:05 2008 +0200 Merge branch 'syncsvn' Conflicts: pkgs/top-level/all-packages.nix commit 52918f1f3af55429cc80c99d695e4a8d8b7869b0 Author: Pjotr Prins <wrk@nema-ws01.wurnet.nl> Date: Mon Oct 6 18:31:06 2008 +0200 arb: Removed xfig as dependency (will add later) arb: Don't recurse chmod settings of shared dir commit c283733782dcbf0dcd88710e83f3eededf8f0866 Merge: e434cdf... a51773a... Author: Pjotr Prins <wrk@nema-ws01.wurnet.nl> Date: Mon Oct 6 17:09:42 2008 +0200 Merge branch 'master' of ssh://bio4.xparrot.eu//export/data/repositories/git/nixpkgs-testing-pjotr commit a51773a3d4295d7ce16e6a7e983ded814180e30a Merge: 290ae0b... 241012c... Author: Pjotr <pjotr.public05@thebird.nl> Date: Mon Oct 6 16:54:14 2008 +0200 Merge branch 'master' of ssh://bio4.xparrot.eu//export/data/repositories/git/nixpkgs-testing-pjotr commit e434cdf9b9acefab4f54e18204ff16af179c442d Merge: ef57566... 241012c... Author: Pjotr Prins <wrk@nema-ws01.wurnet.nl> Date: Mon Oct 6 16:12:27 2008 +0200 Merge branch 'master' of ssh://bio4.xparrot.eu//export/data/repositories/git/nixpkgs-testing-pjotr commit 241012cae194d0f770be2224b5bb18b66e3ae0f0 Author: Pj <wrk@bio03.(none)> Date: Mon Oct 6 16:11:11 2008 +0200 Added older version of lesstif for arb commit 290ae0b802285a8dda41b3c5730e53239d73b47c Merge: dfdf7fe... 53b6ceb... Author: Pjotr <pjotr.public05@thebird.nl> Date: Mon Oct 6 15:20:17 2008 +0200 Merge branch 'master' of ssh://bio4.xparrot.eu//export/data/repositories/git/nixpkgs-testing-pjotr commit dfdf7fe8ac9599ec372bdb83630a236f227ad7d5 Author: Pjotr <pjotr.public05@thebird.nl> Date: Mon Oct 6 15:15:04 2008 +0200 Fixed missing parameters for arb - and added kernelHeaders_2.6.18 commit ef57566834eb786cdcb57a799b7d1cb284eee389 Author: Pjotr Prins <wrk@nema-ws01.wurnet.nl> Date: Mon Oct 6 15:06:26 2008 +0200 Changed arb permissions and priority svn path=/nixpkgs/trunk/; revision=12985
Diffstat (limited to 'pkgs/applications/science')
-rw-r--r--pkgs/applications/science/biology/arb/default.nix8
1 files changed, 4 insertions, 4 deletions
diff --git a/pkgs/applications/science/biology/arb/default.nix b/pkgs/applications/science/biology/arb/default.nix
index d0feae803937..4a732e7750cc 100644
--- a/pkgs/applications/science/biology/arb/default.nix
+++ b/pkgs/applications/science/biology/arb/default.nix
@@ -13,7 +13,7 @@ stdenv.mkDerivation {
patches = [ ./makefile.patch ];
- buildInputs = [ glew mesa libpng libXpm lesstif lynx freeglut libtiff rxp sablotron libXaw perl jdk transfig libX11 libXext libXt gv xfig gnuplot ];
+ buildInputs = [ glew mesa libpng libXpm lesstif lynx freeglut libtiff rxp sablotron libXaw perl jdk transfig libX11 libXext libXt gv gnuplot ];
unpackPhase = ''
tar xzf $src
@@ -34,19 +34,19 @@ stdenv.mkDerivation {
cp -vau lib/pts $shareddir/lib
rm -vrf lib/pts
ln -vs $shareddir/lib/pts $out/lib/pts
- chmod a+rwx -R $shareddir/lib/pts
+ chmod a+rwx $shareddir/lib/pts
# link out writable shared location lib/nas/
ensureDir $shareddir/lib/nas
cp -vau lib/nas $shareddir/lib
rm -vrf lib/nas
ln -vs $shareddir/lib/nas $out/lib/nas
- chmod a+rwx -R $shareddir/lib/nas
+ chmod a+rwx $shareddir/lib/nas
# link out shared lib/pixmaps (not sure about this, yet):
ensureDir $shareddir/lib/pixmaps
cp -vau lib/pixmaps $shareddir/lib
rm -vrf lib/pixmaps
ln -vs $shareddir/lib/pixmaps $out/lib/pixmaps
- chmod a+rwx -R $shareddir/lib/pixmaps
+ chmod a+rwx $shareddir/lib/pixmaps
# bulk copy
cp -vau * $out
# replace arb script