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authorPjotr Prins <pjotr.public01@thebird.nl>2008-07-23 08:22:23 +0000
committerPjotr Prins <pjotr.public01@thebird.nl>2008-07-23 08:22:23 +0000
commit0014ffcbae5218d31a398a71a95c5893361b2199 (patch)
tree8c53a75c73f15dcecff6475bb2e2cc676bf2d7ef /pkgs/applications/science
parent60eabad29650eb0b7e647707662886f3cc883323 (diff)
Updated emboss package to 6.0.1
svn path=/nixpkgs/trunk/; revision=12399
Diffstat (limited to 'pkgs/applications/science')
-rw-r--r--pkgs/applications/science/biology/emboss/default.nix26
1 files changed, 13 insertions, 13 deletions
diff --git a/pkgs/applications/science/biology/emboss/default.nix b/pkgs/applications/science/biology/emboss/default.nix
index 427eb0a432ec..96181c8ee6cb 100644
--- a/pkgs/applications/science/biology/emboss/default.nix
+++ b/pkgs/applications/science/biology/emboss/default.nix
@@ -1,29 +1,29 @@
{stdenv, fetchurl, readline, perl, libX11, libpng, libXt, zlib}:
stdenv.mkDerivation {
- name = "emboss-5.0.0-9";
+ name = "emboss-6.0.1";
src = fetchurl {
- url = ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-5.0.0.tar.gz;
- sha256 = "1bj0bxfj97cgnk3w3123cqn5sq5xsbvzs8bzvqkgy6d7hadz1rk4";
- };
- patch = fetchurl {
- url = ftp://emboss.open-bio.org/pub/EMBOSS/fixes/patches/patch-1-9.gz;
- sha256 = "1pfn5zdxrr71c3kwpdkzmmsqvdwkmynkvcr707vqh73h9cjhk3c1";
+ url = ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.0.1.tar.gz;
+ sha256 = "0g939k9wmpvmy55hqmbbzj6kj6agg4izymv492zqiawxm812jd9y";
};
+ # patch = fetchurl {
+ # url = ftp://emboss.open-bio.org/pub/EMBOSS/fixes/patches/patch-1-9.gz;
+ # sha256 = "1pfn5zdxrr71c3kwpdkzmmsqvdwkmynkvcr707vqh73h9cjhk3c1";
+ # };
buildInputs = [readline perl libpng libX11 libXt zlib];
- preConfigure = ''
- gzip -d $patch | patch -p1
- '';
+ # preConfigure = ''
+ # gzip -d $patch | patch -p1
+ # '';
meta = {
description = "EMBOSS is 'The European Molecular Biology Open Software Suite'";
longDescription = ''EMBOSS is a free Open Source software analysis package
specially developed for the needs of the molecular biology (e.g. EMBnet)
- user community. The software automatically copes with data in a variety of
- formats and even allows transparent retrieval of sequence data from the
- web.'';
+ user community, including libraries. The software automatically copes with
+ data in a variety of formats and even allows transparent retrieval of
+ sequence data from the web.'';
license = "GPL2";
homepage = http://emboss.sourceforge.net/;
};