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{ lib
, buildPythonPackage
, fetchFromGitHub
, pythonOlder
, pytestCheckHook
, atpublic
, cached-property
, click
, clickhouse-cityhash
, clickhouse-driver
, dask
, datafusion
, duckdb
, duckdb-engine
, geoalchemy2
, geopandas
, graphviz-nox
, importlib-metadata
, lz4
, multipledispatch
, numpy
, packaging
, pandas
, parsy
, poetry-core
, poetry-dynamic-versioning
, psycopg2
, pyarrow
, pydantic
, pymysql
, pyspark
, pytest-benchmark
, pytest-randomly
, pytest-mock
, pytest-xdist
, python
, pytz
, regex
, shapely
, sqlalchemy
, sqlite
, tabulate
, toolz
}:
let
testBackends = [
"dask"
"datafusion"
"duckdb"
"pandas"
"sqlite"
];
ibisTestingData = fetchFromGitHub {
owner = "ibis-project";
repo = "testing-data";
rev = "a88a4b3c3b54a88e7f77e59de70f5bf20fb62f19";
sha256 = "sha256-BnRhVwPcWFwiBJ2ySgiiuUdnF4gesnTq1/dLcuvc868=";
};
in
buildPythonPackage rec {
pname = "ibis-framework";
version = "3.0.2";
format = "pyproject";
disabled = pythonOlder "3.8";
src = fetchFromGitHub {
repo = "ibis";
owner = "ibis-project";
rev = version;
hash = "sha256-7ywDMAHQAl39kiHfxVkq7voUEKqbb9Zq8qlaug7+ukI=";
};
nativeBuildInputs = [ poetry-core ];
propagatedBuildInputs = [
atpublic
cached-property
importlib-metadata
multipledispatch
numpy
packaging
pandas
parsy
poetry-dynamic-versioning
pydantic
pytz
regex
tabulate
toolz
];
checkInputs = [
pytestCheckHook
click
pytest-benchmark
pytest-mock
pytest-randomly
pytest-xdist
] ++ lib.concatMap (name: passthru.optional-dependencies.${name}) testBackends;
preBuild = ''
# setup.py exists only for developer convenience and is automatically generated
rm setup.py
'';
pytestFlagsArray = [
"--dist=loadgroup"
"-m"
"'${lib.concatStringsSep " or " testBackends} or core'"
];
preCheck = ''
set -eo pipefail
export IBIS_TEST_DATA_DIRECTORY
IBIS_TEST_DATA_DIRECTORY="$(mktemp -d)"
# copy the test data to a writable directory
cp -r ${ibisTestingData}/* "$IBIS_TEST_DATA_DIRECTORY"
find "$IBIS_TEST_DATA_DIRECTORY" -type d -exec chmod u+rwx {} +
find "$IBIS_TEST_DATA_DIRECTORY" -type f -exec chmod u+rw {} +
# load data
for backend in ${lib.concatStringsSep " " testBackends}; do
${python.interpreter} ci/datamgr.py load "$backend"
done
'';
postCheck = ''
rm -r "$IBIS_TEST_DATA_DIRECTORY"
'';
pythonImportsCheck = [
"ibis"
] ++ map (backend: "ibis.backends.${backend}") testBackends;
passthru = {
optional-dependencies = {
clickhouse = [ clickhouse-cityhash clickhouse-driver lz4 ];
dask = [ dask pyarrow ];
datafusion = [ datafusion ];
duckdb = [ duckdb duckdb-engine sqlalchemy ];
geospatial = [ geoalchemy2 geopandas shapely ];
mysql = [ pymysql sqlalchemy ];
pandas = [ ];
postgres = [ psycopg2 sqlalchemy ];
pyspark = [ pyarrow pyspark ];
sqlite = [ sqlalchemy sqlite ];
visualization = [ graphviz-nox ];
};
};
meta = with lib; {
description = "Productivity-centric Python Big Data Framework";
homepage = "https://github.com/ibis-project/ibis";
license = licenses.asl20;
maintainers = with maintainers; [ costrouc cpcloud ];
};
}
|