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AgeCommit message (Expand)Author
2021-01-07Merge pull request #108432 from jbedo/fastpSandro
2021-01-07fastp: init 0.20.1Justin Bedo
2021-01-06Merge pull request #108437 from jbedo/varscanSandro
2021-01-06Merge pull request #108435 from jbedo/lastSandro
2021-01-05varscan: 2.4.2 -> 2.4.4Justin Bedo
2021-01-05last: 1145 -> 1170Justin Bedo
2021-01-04raxml: cleanupSandro Jäckel
2021-01-03Merge pull request #108251 from prusnak/bowtie2Pavol Rusnak
2021-01-02bowtie2: 2.3.5.1 -> 2.4.2Pavol Rusnak
2021-01-02bowtie: init at at 1.3.0Pavol Rusnak
2020-12-21SPAdes: add python dependencyJustin Bedo
2020-12-14Merge pull request #106856 from jbedo/dellyMario Rodas
2020-12-14delly: 0.8.5 -> 0.8.6Justin Bedo
2020-12-10picard-tools: 2.23.8 -> 2.23.9R. RyanTM
2020-12-02Merge pull request #105672 from r-ryantm/auto-update/hmmerRyan Mulligan
2020-12-02hmmer: 3.3.1 -> 3.3.2R. RyanTM
2020-12-01ants: unbreak on DarwinBen Darwin
2020-11-30bwa: expand supported platformsJustin Bedo
2020-11-28igv: 2.8.12 -> 2.8.13R. RyanTM
2020-11-26Merge pull request #102140 from SuperSandro2000/patch-2Sandro
2020-11-25Merge pull request #98363 from jbedo/mosdepthSandro
2020-11-25tebreak: Fix testsSandro
2020-11-25deeptools: Fix testsSandro
2020-11-23star: 2.7.5c -> 2.7.6aR. RyanTM
2020-11-16Merge pull request #103525 from r-ryantm/auto-update/samblasterRyan Mulligan
2020-11-14Merge pull request #103751 from r-ryantm/auto-update/lastRyan Mulligan
2020-11-13last: 1133 -> 1145R. RyanTM
2020-11-13igv: 2.8.11 -> 2.8.12R. RyanTM
2020-11-12samblaster: 0.1.24 -> 0.1.26R. RyanTM
2020-11-04Merge pull request #102707 from r-ryantm/auto-update/picard-toolsRyan Mulligan
2020-11-04picard-tools: 2.23.4 -> 2.23.8R. RyanTM
2020-11-03Merge pull request #102420 from freezeboy/remove-plinkKevin Cox
2020-11-02igv: 2.8.9 -> 2.8.11R. RyanTM
2020-11-02plink: remove (broken since 2014)freezeboy
2020-10-31last: 1066 -> 1133Justin Bedo
2020-10-30lumpy: 0.3.0 -> 0.3.1Renato Alves
2020-10-29samtools: 1.10 -> 1.11Renato Alves
2020-10-27treewide: remove package names from prefix of descriptionsBen Siraphob
2020-10-17treewide: remove periods from end of package descriptionsBen Siraphob
2020-10-16Merge pull request #99128 from jbedo/dellyRyan Mulligan
2020-10-16deeptools: 3.4.1 -> 3.5.0R. RyanTM
2020-10-15Merge pull request #75843 from jbedo/lumpyDoron Behar
2020-10-06conglomerate: update LIBMINC_DIR to reflect libminc CMake changesBen Darwin
2020-10-06EZminc: update LIBMINC_DIR to reflect libminc CMake changesBen Darwin
2020-10-06mni_autoreg: update LIBMINC_DIR due to CMake changes in libmincBen Darwin
2020-10-06n3: 2017-09-18 -> 2018-08-09Ben Darwin
2020-10-06inormalize: update LIBMINC_DIR and dependencies due to libminc updateBen Darwin
2020-10-06minc_tools: unstable-2019-12-04 -> unstable-2020-07-25Ben Darwin
2020-10-01delly: 0.8.2 -> 0.8.5Justin Bedo
2020-09-30mosdepth: 0.2.9 -> 0.3.1Justin Bedo
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