R: update CRAN and BIOC package sets

Closes https://github.com/NixOS/nixpkgs/pull/49430.

1 files changed, 161 insertions, 137 deletions

diff --git a/pkgs/development/r-modules/bioc-annotation-packages.nix b/pkgs/development/r-modules/bioc-annotation-packages.nix
index 54c4968607df..863d7c9fcfe0 100644
--- a/pkgs/development/r-modules/bioc-annotation-packages.nix
+++ b/pkgs/development/r-modules/bioc-annotation-packages.nix
@@ -7,11 +7,12 @@
 let derive2 = derive { biocVersion = "3.8"; };
 in with self; {
   AHCytoBands = derive2 { name="AHCytoBands"; version="0.99.0"; sha256="0g92nz33rx14zl5can7s701bipdgz7rxqygvvc22c4a0qj52ijnq"; depends=[]; };
-  AHEnsDbs = derive2 { name="AHEnsDbs"; version="1.0.6"; sha256="1sdxj2rxhc2cj2rgfif2flnic57zkdrhdvhr3y64amcmrp57xgj4"; depends=[AnnotationHubData ensembldb]; };
+  AHEnsDbs = derive2 { name="AHEnsDbs"; version="1.0.8"; sha256="1v1177l4y0l546mzp8ybhvhnjwrsck5bkic8w6n6n2xq07d6aahz"; depends=[AnnotationHubData ensembldb]; };
   BSgenome_Alyrata_JGI_v1 = derive2 { name="BSgenome.Alyrata.JGI.v1"; version="1.0.0"; sha256="06549kkzy36n378zb61lrf9zardncp7i20r73rmmiq1pnfjp3gww"; depends=[BSgenome]; };
   BSgenome_Amellifera_BeeBase_assembly4 = derive2 { name="BSgenome.Amellifera.BeeBase.assembly4"; version="1.4.0"; sha256="02zs16q441zcbfp7xvv1gny5nn02ivfr8md1wh5s5rpnj6sdl6kj"; depends=[BSgenome]; };
   BSgenome_Amellifera_UCSC_apiMel2 = derive2 { name="BSgenome.Amellifera.UCSC.apiMel2"; version="1.4.0"; sha256="1967w7aly7qydykk7rar712kvgsav3zjr4kirybkj17nwiynd74g"; depends=[BSgenome]; };
   BSgenome_Amellifera_UCSC_apiMel2_masked = derive2 { name="BSgenome.Amellifera.UCSC.apiMel2.masked"; version="1.3.99"; sha256="128jmpnpbz1afqvhvdc9vrc8gmlyg26ca7qz362qsx89jrm4khpr"; depends=[BSgenome BSgenome_Amellifera_UCSC_apiMel2]; };
+  BSgenome_Aofficinalis_NCBI_V1 = derive2 { name="BSgenome.Aofficinalis.NCBI.V1"; version="1.0.0"; sha256="0n6m5jnpiz6bv46b7s396qkxha2d8271j747j50v2zb6a7wd0rjr"; depends=[BSgenome]; };
   BSgenome_Athaliana_TAIR_04232008 = derive2 { name="BSgenome.Athaliana.TAIR.04232008"; version="1.3.1000"; sha256="0dsbjfh2yf0v3zmbypn9p3alvwhfw2qyr5vivyj7x9ablylb6qxc"; depends=[BSgenome]; };
   BSgenome_Athaliana_TAIR_TAIR9 = derive2 { name="BSgenome.Athaliana.TAIR.TAIR9"; version="1.3.1000"; sha256="0n45sn80c5nchfj1wzbcaicfyg66id2zhr5xm3w238idkbj05l00"; depends=[BSgenome]; };
   BSgenome_Btaurus_UCSC_bosTau3 = derive2 { name="BSgenome.Btaurus.UCSC.bosTau3"; version="1.4.0"; sha256="0vh3664q7pynfw763pwg2h74h0ncmi5nslvj7y5bj1q7pvf03zpc"; depends=[BSgenome]; };
@@ -21,6 +22,7 @@ in with self; {
   BSgenome_Btaurus_UCSC_bosTau6 = derive2 { name="BSgenome.Btaurus.UCSC.bosTau6"; version="1.4.0"; sha256="0waaf9wfmdl5jbi3la64vsiqb83lyw9fqg3sn90bf1q7k3k617p3"; depends=[BSgenome]; };
   BSgenome_Btaurus_UCSC_bosTau6_masked = derive2 { name="BSgenome.Btaurus.UCSC.bosTau6.masked"; version="1.3.99"; sha256="07isv0lcvlsl0aha1p474l0pps0j7bsh455m33vfxwahivqsfy27"; depends=[BSgenome BSgenome_Btaurus_UCSC_bosTau6]; };
   BSgenome_Btaurus_UCSC_bosTau8 = derive2 { name="BSgenome.Btaurus.UCSC.bosTau8"; version="1.4.2"; sha256="16wjy1aw9nvx03r7w8yh5w7sw3pn8i9nczd0n0728l6nnyqxlsz6"; depends=[BSgenome]; };
+  BSgenome_Carietinum_NCBI_v1 = derive2 { name="BSgenome.Carietinum.NCBI.v1"; version="1.0.0"; sha256="1asyyb1p1bzc7dv9s2igjxrf9f144vvz2xbv9qxg15w9qzzx7r33"; depends=[BSgenome]; };
   BSgenome_Celegans_UCSC_ce10 = derive2 { name="BSgenome.Celegans.UCSC.ce10"; version="1.4.0"; sha256="1zaym97jk4npxk14ifvwz2rvhm4zx9xgs33r9vvx9rlynp0gydrk"; depends=[BSgenome]; };
   BSgenome_Celegans_UCSC_ce11 = derive2 { name="BSgenome.Celegans.UCSC.ce11"; version="1.4.2"; sha256="0d4bxfglpqiv1f0n6imdgz101g9383hfj3ra91268wryzlm0yk5w"; depends=[BSgenome]; };
   BSgenome_Celegans_UCSC_ce2 = derive2 { name="BSgenome.Celegans.UCSC.ce2"; version="1.4.0"; sha256="1x7nvisz7mjrpqlsiw4an04f8hksygzn96p5ld0388hljg78dax8"; depends=[BSgenome]; };
@@ -78,6 +80,7 @@ in with self; {
   BSgenome_Ptroglodytes_UCSC_panTro3 = derive2 { name="BSgenome.Ptroglodytes.UCSC.panTro3"; version="1.4.0"; sha256="1vbfx0zrj4rcwcsm1q09xdiv0mmrycj8223lnxqb8nr5r017f7gm"; depends=[BSgenome]; };
   BSgenome_Ptroglodytes_UCSC_panTro3_masked = derive2 { name="BSgenome.Ptroglodytes.UCSC.panTro3.masked"; version="1.3.99"; sha256="18ga0whdcp5zpigrmh68wjmn99lzvfyvgxjm58y0jx66rmg94mir"; depends=[BSgenome BSgenome_Ptroglodytes_UCSC_panTro3]; };
   BSgenome_Ptroglodytes_UCSC_panTro5 = derive2 { name="BSgenome.Ptroglodytes.UCSC.panTro5"; version="1.4.2"; sha256="0wxciajcyf0hr6g6zcji125jm18nnspwvnv5x3jibjvxzx55gcds"; depends=[BSgenome]; };
+  BSgenome_Ptroglodytes_UCSC_panTro6 = derive2 { name="BSgenome.Ptroglodytes.UCSC.panTro6"; version="1.4.2"; sha256="1l1fqnw1iqb2a7kvyvb0m1vdvq6cxs6py92yvbaf4zwklmgmdq0b"; depends=[BSgenome]; };
   BSgenome_Rnorvegicus_UCSC_rn4 = derive2 { name="BSgenome.Rnorvegicus.UCSC.rn4"; version="1.4.0"; sha256="1aww2bxyqbb81iln3vgrb0659r82v9yv1z41k9r3zws8b7k7df6x"; depends=[BSgenome]; };
   BSgenome_Rnorvegicus_UCSC_rn4_masked = derive2 { name="BSgenome.Rnorvegicus.UCSC.rn4.masked"; version="1.3.99"; sha256="0jfv1873ab1nwwdr18vrjqcdl4rhv3xgqbf4jfnjk7sjx154pfi6"; depends=[BSgenome BSgenome_Rnorvegicus_UCSC_rn4]; };
   BSgenome_Rnorvegicus_UCSC_rn5 = derive2 { name="BSgenome.Rnorvegicus.UCSC.rn5"; version="1.4.0"; sha256="1s92983m73bi08ihvyd8c17yx29hz5xxrnrs2if8fda4asw1f3f0"; depends=[BSgenome]; };
@@ -105,6 +108,7 @@ in with self; {
   EnsDb_Mmusculus_v79 = derive2 { name="EnsDb.Mmusculus.v79"; version="2.99.0"; sha256="1zpmq7v55if6q9r0h883q9k8l70ym20b01m9hxf121wb256rl9f7"; depends=[ensembldb]; };
   EnsDb_Rnorvegicus_v75 = derive2 { name="EnsDb.Rnorvegicus.v75"; version="2.99.0"; sha256="02sx9l1p67ihkn0dfzbi08cpp8x4k2mjdqn7hvzfiaibsbqp70bb"; depends=[ensembldb]; };
   EnsDb_Rnorvegicus_v79 = derive2 { name="EnsDb.Rnorvegicus.v79"; version="2.99.0"; sha256="1ki2hrn0a55f3ipxny0hpgl5ld9pjkhcwmvvqwwd99f3sqbxf3br"; depends=[ensembldb]; };
+  EuPathDB = derive2 { name="EuPathDB"; version="1.0.0"; sha256="08yl7zx5j6ywnrdcrrsvfkkxnvhrhrcddxw0g5sv90gy55zgv86n"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDbData GenomicRanges]; };
   FDb_FANTOM4_promoters_hg19 = derive2 { name="FDb.FANTOM4.promoters.hg19"; version="1.0.0"; sha256="04sn5x1r5fcbghzw6n1bvy0z8zyhrbk86wsqz1p5gk665vicz8rw"; depends=[AnnotationDbi Biostrings GenomicFeatures]; };
   FDb_InfiniumMethylation_hg18 = derive2 { name="FDb.InfiniumMethylation.hg18"; version="2.2.0"; sha256="0vwzqzj49imjdsn8ssiwqi7qic7rqw5pbsiinyxgy7y10fn2i42a"; depends=[AnnotationDbi Biostrings GenomicFeatures org_Hs_eg_db TxDb_Hsapiens_UCSC_hg18_knownGene]; };
   FDb_InfiniumMethylation_hg19 = derive2 { name="FDb.InfiniumMethylation.hg19"; version="2.2.0"; sha256="0gq90fvph6kgrpjb89nvzq6hl1k24swn19rgjh5g98l86mja6nk0"; depends=[AnnotationDbi Biostrings GenomicFeatures org_Hs_eg_db TxDb_Hsapiens_UCSC_hg19_knownGene]; };
@@ -112,8 +116,8 @@ in with self; {
   FDb_UCSC_snp137common_hg19 = derive2 { name="FDb.UCSC.snp137common.hg19"; version="1.0.0"; sha256="1q1r7rk29q0zlzxz6fvfy1kjfli6wxzvhvhhfnf3z4ksy5332q63"; depends=[AnnotationDbi GenomicFeatures]; };
   FDb_UCSC_tRNAs = derive2 { name="FDb.UCSC.tRNAs"; version="1.0.1"; sha256="1dymdalx9fzrplxyc0fd9faa4r5jimi7zyry9k65lyz1pabpkwqz"; depends=[AnnotationDbi GenomicFeatures]; };
   GGHumanMethCancerPanelv1_db = derive2 { name="GGHumanMethCancerPanelv1.db"; version="1.4.1"; sha256="0ag1pkbh4mx4aplfrrz1q4f4cl05mczq9pcsfkd1071qk51dcwvx"; depends=[AnnotationDbi AnnotationForge org_Hs_eg_db]; };
-  GO_db = derive2 { name="GO.db"; version="3.6.0"; sha256="0fi2qywr9apg5lwfqfq9qq6bgrnv4rdhxx25656qn4bsy62i838j"; depends=[AnnotationDbi]; };
-  GenomeInfoDbData = derive2 { name="GenomeInfoDbData"; version="1.1.0"; sha256="0k1hsjx6n2i1sf14hyrgdhxqxm5mxk0bgnivhiax944whcicmzbf"; depends=[]; };
+  GO_db = derive2 { name="GO.db"; version="3.7.0"; sha256="0i3wcf5h3n0dawzc1hy0kv74f06j80c47n4p3g3fmrcxlhi3jpa5"; depends=[AnnotationDbi]; };
+  GenomeInfoDbData = derive2 { name="GenomeInfoDbData"; version="1.2.0"; sha256="0di6nlqpsyqf693k2na65ayqldih563x3zfrczpqc5q2hl5kg35c"; depends=[]; };
   Homo_sapiens = derive2 { name="Homo.sapiens"; version="1.3.1"; sha256="151vj7h5p1c8yd5swrchk46z469p135wk50hvkl0nhgndvy0jj01"; depends=[AnnotationDbi GenomicFeatures GO_db org_Hs_eg_db OrganismDbi TxDb_Hsapiens_UCSC_hg19_knownGene]; };
   Hs6UG171_db = derive2 { name="Hs6UG171.db"; version="3.2.3"; sha256="034aady3hy8j9bm7pbl8l8h0gcfnzmpyxg9l9s1ky0pj7ryzr93a"; depends=[AnnotationDbi org_Hs_eg_db]; };
   HsAgilentDesign026652_db = derive2 { name="HsAgilentDesign026652.db"; version="3.2.3"; sha256="0x6nxvzmc8k4qp382ca32y58awkxpg0b3kc7m1mz9iag6sq7c5vx"; depends=[AnnotationDbi org_Hs_eg_db]; };
@@ -136,6 +140,18 @@ in with self; {
   JazaeriMetaData_db = derive2 { name="JazaeriMetaData.db"; version="3.2.3"; sha256="04lvcmm4ybxkfwgbiwcnpyj6kpbd0gd7jz6ijlbbvv6zdgdmvykb"; depends=[AnnotationDbi org_Hs_eg_db]; };
   KEGG_db = derive2 { name="KEGG.db"; version="3.2.3"; sha256="0qv9in1nmnqcbjxh0y45x33xyw9zdp4jf5hmlvcsh1pclcq4dsh2"; depends=[AnnotationDbi]; };
   LAPOINTE_db = derive2 { name="LAPOINTE.db"; version="3.2.3"; sha256="0960gy5p4ybs5zs6251cgc3nk5a9gsh1nh23gkbkr3gc8jddinfm"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  LRBase_Ath_eg_db = derive2 { name="LRBase.Ath.eg.db"; version="0.99.1"; sha256="0v7zyp6mngdfrqgx0fb6lj0ara7q4ch2dahnwqjk5y9psmvi8m16"; depends=[LRBaseDbi RSQLite]; };
+  LRBase_Bta_eg_db = derive2 { name="LRBase.Bta.eg.db"; version="0.99.1"; sha256="14yl5d4vmm2hjrlxsflwvkw18j0kcz364b3mc3fnxzbk8phisy3l"; depends=[LRBaseDbi RSQLite]; };
+  LRBase_Cel_eg_db = derive2 { name="LRBase.Cel.eg.db"; version="0.99.1"; sha256="18w8ay874qjs4qgb3g1j77k2fspvvvbyy3p85wgzy1yl839ngy3b"; depends=[LRBaseDbi RSQLite]; };
+  LRBase_Dme_eg_db = derive2 { name="LRBase.Dme.eg.db"; version="0.99.1"; sha256="0qbc5942g57mjdlhqpnapwq58bmi5xbc0mrqbqkfbxpx881ka2v6"; depends=[LRBaseDbi RSQLite]; };
+  LRBase_Dre_eg_db = derive2 { name="LRBase.Dre.eg.db"; version="0.99.1"; sha256="0wpx9dg2nhw20f3vvmaqy5yip8xwg1niswspxs4jv9krd0z6h5d8"; depends=[LRBaseDbi RSQLite]; };
+  LRBase_Gga_eg_db = derive2 { name="LRBase.Gga.eg.db"; version="0.99.1"; sha256="0nycj3h69ca2gxxmc08zvf0jv5zylfayhd6sgzrmqz0zsr0n5fxk"; depends=[LRBaseDbi RSQLite]; };
+  LRBase_Hsa_eg_db = derive2 { name="LRBase.Hsa.eg.db"; version="0.99.1"; sha256="0g690d63sp5pb0i28zvi80y41n6b31mzza46invjvq9c1j2rijzd"; depends=[LRBaseDbi RSQLite]; };
+  LRBase_Mmu_eg_db = derive2 { name="LRBase.Mmu.eg.db"; version="0.99.1"; sha256="0kmd69a31hw8i2p8qg64m074ypa102cfa7qpyz2m7nr6gwb3ik3z"; depends=[LRBaseDbi RSQLite]; };
+  LRBase_Pab_eg_db = derive2 { name="LRBase.Pab.eg.db"; version="0.99.1"; sha256="0scycwpdmr6yvfyqsani1372pmyqxzvv30wsvy8hx3km7dcd4ypz"; depends=[LRBaseDbi RSQLite]; };
+  LRBase_Rno_eg_db = derive2 { name="LRBase.Rno.eg.db"; version="0.99.1"; sha256="1b5rzb9kpnak90fb55y380qmspd8gah3wxvsliv1lddab65m5ch3"; depends=[LRBaseDbi RSQLite]; };
+  LRBase_Ssc_eg_db = derive2 { name="LRBase.Ssc.eg.db"; version="0.99.1"; sha256="1p1crrh3wkinvhqmy9b1h4j9yfvwbsykhm6b0xlhn0kzdqxlizjf"; depends=[LRBaseDbi RSQLite]; };
+  LRBase_Xtr_eg_db = derive2 { name="LRBase.Xtr.eg.db"; version="0.99.1"; sha256="0aqzcll2ylzbbq42ns0hp7l9p6343l2qlsv5zkglla1bxdxl6m4h"; depends=[LRBaseDbi RSQLite]; };
   LowMACAAnnotation = derive2 { name="LowMACAAnnotation"; version="0.99.3"; sha256="0ri301ci54s8wwkah1jccy5h44xg8yjk08j5b15qmdsm25hli4wm"; depends=[]; };
   LymphoSeqDB = derive2 { name="LymphoSeqDB"; version="0.99.2"; sha256="1cdyn2imjh4zr23szndc4vwyiacxs1jsp14gil2dyq9aifa25qr7"; depends=[]; };
   MafDb_1Kgenomes_phase1_GRCh38 = derive2 { name="MafDb.1Kgenomes.phase1.GRCh38"; version="3.7.0"; sha256="160whyhwjspqji6ys19qgi4y3k7z1qqzr75nhpw0yl8h1rc6rfg0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
@@ -148,86 +164,91 @@ in with self; {
   MafDb_ExAC_r1_0_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.hs37d5"; version="3.7.0"; sha256="00b022hzwr0l6m9wzw76iirdq5szvi5z8a9yi2i44sydhwqsb4cy"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
   MafDb_ExAC_r1_0_nonTCGA_GRCh38 = derive2 { name="MafDb.ExAC.r1.0.nonTCGA.GRCh38"; version="3.7.0"; sha256="1dvzzwj9dhrls8caabdcgddsk64a6q9jqcya424h8n48fkx6fpjn"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
   MafDb_ExAC_r1_0_nonTCGA_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.nonTCGA.hs37d5"; version="3.7.0"; sha256="10rn7nqrnhmhdqcygi8l3cwf1385jyy56qzqjgqyhvmi4g8dnjsn"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MafDb_TOPMed_freeze5_hg19 = derive2 { name="MafDb.TOPMed.freeze5.hg19"; version="3.7.1"; sha256="0a8rgh3lkbplg3y1yl0804f55dlw7v8lcb33ygg8kg39dk60m102"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
   MafDb_TOPMed_freeze5_hg38 = derive2 { name="MafDb.TOPMed.freeze5.hg38"; version="3.7.1"; sha256="1kxk3qqw1igkygqmj8yjl4cp99fan1w84gilh6q35nsaja0fapa8"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MafDb_gnomAD_r2_0_1_GRCh38 = derive2 { name="MafDb.gnomAD.r2.0.1.GRCh38"; version="3.7.0"; sha256="0dp82x6dag4ndizvppr2g5x1v8sbj08r6n7mi98c89fn4f7nvqqw"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MafDb_gnomAD_r2_0_1_hs37d5 = derive2 { name="MafDb.gnomAD.r2.0.1.hs37d5"; version="3.8.0"; sha256="0kb50g4kmj1b4xm9p8q6j1yzpv5ygxf71vqhkb7c0ajqffqbyznm"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MafDb_gnomAD_r2_1_hs37d5 = derive2 { name="MafDb.gnomAD.r2.1.hs37d5"; version="3.8.0"; sha256="00ld23685xlrkx9rpgrcqaycq3zxbxqg734r99avrw8p3lmj4fvc"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
   MafDb_gnomADex_r2_0_1_GRCh38 = derive2 { name="MafDb.gnomADex.r2.0.1.GRCh38"; version="3.7.0"; sha256="0hwyyqa4g3hp85hk4b6qfzm10yk6h20sh0f2mf09yr0hpmkjyl59"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
-  MafDb_gnomADex_r2_0_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.0.1.hs37d5"; version="3.7.0"; sha256="1y1kzbs37h804c81rll64kz83rpzmzl1z410frabyyblpxm275j5"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
-  MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.10.0"; sha256="0dc2j64v93j7gj28yl9lpbxdqlqszr8sn3p7jbkcwixgpczhqzbj"; depends=[MeSHDbi]; };
-  MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.10.0"; sha256="1p0495kyg2vcbf98scfxb1iidn4xvv1r1jwxx40g1fjwl1s0rm4k"; depends=[MeSHDbi]; };
-  MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.10.0"; sha256="0ipnzigw2791fgzr6s2a8m4idpicwlk46pplq9q3ql9ss0nw4swi"; depends=[MeSHDbi]; };
-  MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.10.0"; sha256="1kpr0li13kwn2ynnghaj775ln7zxim8jdasbrmnyrq8b61v1784s"; depends=[MeSHDbi]; };
-  MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.10.0"; sha256="0aa6qgk9vwdkwykkml10j0vcjp53ypa2p3p8za9qgfk0r19831wi"; depends=[MeSHDbi]; };
-  MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.10.0"; sha256="1v81wccvd2kgx05h2lffbdjkl8xsdb0f5h2i12csfnlhfgvgasdf"; depends=[MeSHDbi]; };
-  MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.10.0"; sha256="0caii8lq500rc5kaqq354zldrb2b0zapypqzr6kfh4swa6fa90x5"; depends=[MeSHDbi]; };
-  MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.10.0"; sha256="1x33f3g8951kawq3j1p1aic9jlx10dbf8qb1g0yrcrq1nvxnywlq"; depends=[MeSHDbi]; };
-  MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.10.0"; sha256="1inpqz39ingljyjsp9v7mfvx8jcmmmkc3p3k4ffcw9xfd17iiw9s"; depends=[MeSHDbi]; };
-  MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.10.0"; sha256="1bwmy42s7rvnng5p1lqcbjhxvw42pr9gbyp7r1951n69f1311n45"; depends=[MeSHDbi]; };
-  MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.10.0"; sha256="1fw30l682sfcpdqqg8r5vyk0slxx00k1agxgli1syhvhh1hrbnxx"; depends=[MeSHDbi]; };
-  MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.10.0"; sha256="0xgzsvqr62g8gipz1i73mxrbg8784axc6hj82v034i03zh0kz2rp"; depends=[MeSHDbi]; };
-  MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.10.0"; sha256="136cg8nmwhc6iplzj2wxmgy4nggi3532xv3kff0hx85g5nbj6k6g"; depends=[MeSHDbi]; };
-  MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.10.0"; sha256="05wj3ib1xjiy2asz41h32r29371qyd8dc3xrx78wwfj2a7760b4y"; depends=[MeSHDbi]; };
-  MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.10.0"; sha256="1b8jc8gc62knhkl0g6isx6d0kb2b33mydb0wpp3v0xlmzpv3f4qn"; depends=[MeSHDbi]; };
-  MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.10.0"; sha256="0qiwjxrjz7np4ml2hxdqfqmjaql5hgnzv2919rcxfikp5cxq7b51"; depends=[MeSHDbi]; };
-  MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.10.0"; sha256="06vk6imry285qcmgcrjqlxj0ihxqasg94ap18xcxiwwps1dbha89"; depends=[MeSHDbi]; };
-  MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.10.0"; sha256="1xv54fhn44l3kjgbmrga3lfqjjf3zgwprm0j518qlvycxvr41znr"; depends=[MeSHDbi]; };
-  MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.10.0"; sha256="0582xmkwmpr3hjsh9qzv6q60bypdmrk34rcp0jzzqjnfrn9mxasb"; depends=[MeSHDbi]; };
-  MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.10.0"; sha256="1cjzilbbw6r5sayy8bifx9rrbj3y95yzm8vdpxg5y1kvsa8047y1"; depends=[MeSHDbi]; };
-  MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.10.0"; sha256="099s4v5rr0jpzh8x60cjb7rxz8c4f8m2s3r09cgzi1fxpmmlzspm"; depends=[MeSHDbi]; };
-  MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.10.0"; sha256="0apr6i080wkhb5s5h6v64b40wdx6fygn422vllwicjkqxllbaa4x"; depends=[MeSHDbi]; };
-  MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.10.0"; sha256="1ln50lqba33vsvbk6wydgm2akpnvv92305zxcpbl6d2px0xbjldz"; depends=[MeSHDbi]; };
-  MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.10.0"; sha256="0nwag2828j1hqx6biihnpprzbrimc7as3nn3p4kkhs067bz457ny"; depends=[MeSHDbi]; };
-  MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.10.0"; sha256="1bcqyrcff510l5my5wha0yrl76wznm7xljlbv24q1i2mjb00x087"; depends=[MeSHDbi]; };
-  MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.10.0"; sha256="1zsq4fkr2bqcfdf1v5w3gn5x29f1q9y4b4qx7nhiipfwiybnjdpd"; depends=[MeSHDbi]; };
-  MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.10.0"; sha256="1xr4h3d3fs20cfwzaj1jjipfnbbvgmx7rlmxfvv8q8hxpfzp7vsp"; depends=[MeSHDbi]; };
-  MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.10.0"; sha256="1hjywgbgbpgsk8hhwlfz9phx3hwi14j9yxa8zmbas3w9cf9hg35a"; depends=[MeSHDbi]; };
-  MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.10.0"; sha256="05mhyfjj2m1mx575nyc53lrwhj0lip4bcv5xa37swz7n1x821bnq"; depends=[MeSHDbi]; };
-  MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.10.0"; sha256="03vrcnfcpj1ayrfawwqgvdvb7mymkwng36pr8p491l8vmk4yhsgs"; depends=[MeSHDbi]; };
-  MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.10.0"; sha256="113zcn037fx15g5xipz9bczw0b913yd8sp4l3yg8zffai8qmhwcj"; depends=[MeSHDbi]; };
-  MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.10.0"; sha256="00i6r7fhqrnbyxmkcpvsyhm1wzmskmrqnfsvd7ls0xcw3h6lpp7v"; depends=[MeSHDbi]; };
-  MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.10.0"; sha256="1azyzg3ak01mbgdw8l7csgiwpzd5fwk6h3x8n261xxm1yd5f1g9l"; depends=[MeSHDbi]; };
-  MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.10.0"; sha256="0j7rga9n6gl6k1gh5ppz742gy4swriwwnfavrjam6k6inl40as57"; depends=[MeSHDbi]; };
-  MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.10.0"; sha256="0cibmy5hyg7aw960cb9zbqdaabbh9f5mwlxdv9gynghkxrqppcaq"; depends=[MeSHDbi]; };
-  MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.10.0"; sha256="1yw0kamb6j25cv3fz7649n43slaxah0f6yzwhglsa4fjffam1ycm"; depends=[MeSHDbi]; };
-  MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.10.0"; sha256="129yw8yrm89rv999va8pn7513c0dl1r1xffsdc01i4wadhq3rrx0"; depends=[MeSHDbi]; };
-  MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.10.0"; sha256="17faizllk30rcw66arfr2nkcx4a70vkjzsca1zf7wpl9myad1r3q"; depends=[MeSHDbi]; };
-  MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.10.0"; sha256="1hqm92vmrg5s07dkr1xa7a2jwspx90v969piba3cf6gdmjw81p5j"; depends=[MeSHDbi]; };
-  MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.10.0"; sha256="06cvyg8ib4dkcn92br7wkx9bj36dji9lsn53aliyj6h5sq6ssvfn"; depends=[MeSHDbi]; };
-  MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.10.0"; sha256="11q2gv8c5cv7ll22f6w34pqr7r8jzgkx1bhwl4fj49s8n7rfh0cg"; depends=[MeSHDbi]; };
-  MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.10.0"; sha256="1gw20014wcf67n574p6r7cwcchyk3c915bbkqcwkj25bvvk4cmga"; depends=[MeSHDbi]; };
-  MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.10.0"; sha256="1hh81rhr3iq8a98w7lvbz6cwjq0hfcxrazv7sdy0pjggd12l991r"; depends=[MeSHDbi]; };
-  MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.10.0"; sha256="0p6zhf5fjh5bn1ibmmmjmnpfp2vplx84fa1zbs7djg96vpvz8flp"; depends=[MeSHDbi]; };
-  MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.10.0"; sha256="1f497wkvbgw11887gsbcygi38xj2fb4vxg34k3jf668yq1x25jcm"; depends=[MeSHDbi]; };
-  MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.10.0"; sha256="1mfg8vbqgqbb573ddv7pp3k2nl4gq27jc472rp4y3x4g8b2ci5hv"; depends=[MeSHDbi]; };
-  MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.10.0"; sha256="1l27hl4cl1h02k9al51485f61qlwwqmsgyp46dcvvdg1l8hlckmq"; depends=[MeSHDbi]; };
-  MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.10.0"; sha256="0vvkgbvg6kzl4w8jbvlvaawkxc2j3x1pipqf6q4niy0yk951r30r"; depends=[MeSHDbi]; };
-  MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.10.0"; sha256="02mp7q0g7by8ihjpjwc39d6kwnwpxkn6xhx9v6fzdfy4q558qpnk"; depends=[MeSHDbi]; };
-  MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.10.0"; sha256="1248y32km28aaj92caar8c97bmkml7853l8xp643vxawgwlmc7a6"; depends=[MeSHDbi]; };
-  MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.10.0"; sha256="09576k1m19mjsdm17iw78djn9pb21g5i237rqrdk709rifar6nny"; depends=[MeSHDbi]; };
-  MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.10.0"; sha256="0azrd1jmyyk6n9whgc3jdaqmalqal3vw6sx5cr84m9cbv9b9c9s1"; depends=[MeSHDbi]; };
-  MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.10.0"; sha256="0cgq3caxikrv22y19fg4gpphz4cf3xb2w0s0rsnmwb1bkj57y2x2"; depends=[MeSHDbi]; };
-  MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.10.0"; sha256="1w118c82694wplqr5q7wvzgcdhf9cm2cbyhajlvh9iad089m4cam"; depends=[MeSHDbi]; };
-  MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.10.0"; sha256="0ka2fsmznlaxn24sqg5fvfy7y9plwqywr75hxfxls3dcykhvsn4r"; depends=[MeSHDbi]; };
-  MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.10.0"; sha256="0cqwnjz77r5faf0gi39hg802hxwswzab56m8l55w9paxq4p5n1jx"; depends=[MeSHDbi]; };
-  MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.10.0"; sha256="0gjnbah7ik8sarx05y6hzl94s669j4c8gxi5n6fa6pb9b4kilqfw"; depends=[MeSHDbi]; };
-  MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.10.0"; sha256="11gfdh385vcyzwwszj8fjfbw06ksra677fhmj99f4nrbnvbdjlc8"; depends=[MeSHDbi]; };
-  MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.10.0"; sha256="0yb0qg11fwpk47kb06w4ck518jff9x2j4kkfi254lbn7asawlgv3"; depends=[MeSHDbi]; };
-  MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.10.0"; sha256="0fzcg6m73qa1fzzbq0kqir69axxcgilr0r3kgajrh8hfdrqvxhx2"; depends=[MeSHDbi]; };
-  MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.10.0"; sha256="0kmsmdpvjnfa2wqdpka70wl5cbpf7bc0bvnf2lj559sdg18glr0d"; depends=[MeSHDbi]; };
-  MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.10.0"; sha256="106wa8vv3v13yn3c3dfbqsp5gm8g2bh1r5yc6kynp3pyxxwnmmpi"; depends=[MeSHDbi]; };
-  MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.10.0"; sha256="000p0jvdwxjkkzh94llzxbhdp5q76d3n8wbgk7iblxwm7aq48q4l"; depends=[MeSHDbi]; };
-  MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.10.0"; sha256="04mn9gihl6zdv7d05f7q2jvr9xh6f2276p38rxq13xyh1y797lsf"; depends=[MeSHDbi]; };
-  MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.10.0"; sha256="1h8x4jwcn0dra927nb5s0dq2w4rv8vdmf82vd17xpj46f051k10m"; depends=[MeSHDbi]; };
-  MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.10.0"; sha256="09s2q794zylkv7ac73dja8cm3i33dv334dzyppw4d3hjdc7fbb8h"; depends=[MeSHDbi]; };
-  MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.10.0"; sha256="1dbhnyppwq1hhs71a123c0l3zlvmgzys71wlihvfp9cbz65cav6p"; depends=[MeSHDbi]; };
-  MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.10.0"; sha256="0m3pa3nap2z0sdw0fcx74jly8rkpvrqjzjhjqbck86zirzw48r82"; depends=[MeSHDbi]; };
-  MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.10.0"; sha256="000d65ba942dqk73jbp7hf8jkq5jhvy5b3xqqbmqjp0a3m1pm6ln"; depends=[MeSHDbi]; };
-  MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.10.0"; sha256="16294ss0i9vpsxapn0m6awf7bl8nglh6ir2i0z47985vaclzx86x"; depends=[MeSHDbi]; };
-  MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.10.0"; sha256="050lv051549bcx1n7hlbgh76wxwmz9yrdn0582ixmc240jvgg8xs"; depends=[MeSHDbi]; };
-  MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.10.0"; sha256="1nhnqljin6ia8ra6ma3hkabsnm7vqad411a6bb16yfn9c384c0x9"; depends=[MeSHDbi]; };
-  MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.10.0"; sha256="0zg433hj5f0l7lls4172lv3f3vnr90gc5fxiifpviam2ibv1r114"; depends=[MeSHDbi]; };
-  MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.10.0"; sha256="08yzw25ahckffy6sqwp0qbsp79jr00dk2qgs0g7k3yv7j86yfla9"; depends=[MeSHDbi]; };
-  MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.10.0"; sha256="0bkd4skxdv3ffhq21j74ghg1ksgd0666rbj89d3c01dyn0dhb1lv"; depends=[MeSHDbi]; };
-  MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.10.0"; sha256="0zhkq8skl4ahbqims1s72m5mf59lvjvzz1x6fg9kwbskfv4y3i93"; depends=[MeSHDbi]; };
-  MeSH_db = derive2 { name="MeSH.db"; version="1.10.0"; sha256="1vh7r2din6746z2v4z42inhyyhywi9lahwszm6z42rirzxhcg3xz"; depends=[MeSHDbi]; };
+  MafDb_gnomADex_r2_0_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.0.1.hs37d5"; version="3.8.0"; sha256="0xz6ayip0cdbal6gsc8wpjyg3rr1kadaddv8flw5k8ky84mckzbc"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MafDb_gnomADex_r2_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.1.hs37d5"; version="3.8.0"; sha256="06vicw9z05j1pw30sw0f2nkcixc14yn3anq0g3317i3rb1kvmwid"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.11.0"; sha256="02ysykmbn1b6rv3fbq71g9lnv16gvxyvb9p9smvm0k9brb7s0q24"; depends=[MeSHDbi]; };
+  MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.11.0"; sha256="13x69ki5g99hravrfdll98z2n7nghvf02v920q4g2bgjzzh68sks"; depends=[MeSHDbi]; };
+  MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.11.0"; sha256="1sffv89v1vrlgy36kf7q7ixnc2iwfaa2h0dsxrg0pjmzsq669h9s"; depends=[MeSHDbi]; };
+  MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.11.0"; sha256="0ssivaq31rjagw5sdjg9ai3bm73mdvdrkqz0snf3phdgxpvldqms"; depends=[MeSHDbi]; };
+  MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.11.0"; sha256="0cl95vipqcjf1pb9bjzvxa4dc0d5rzac84n9f6l061vhifa2c3pn"; depends=[MeSHDbi]; };
+  MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.11.0"; sha256="190h3pch16bzx0h674kwywcy3pr1y16jbzczbmmvsxg1l2j549zm"; depends=[MeSHDbi]; };
+  MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.11.0"; sha256="0w6gq9xy1v84ksbd849jpj073s51fbhgss8wl6ax4ybxvfp22m0s"; depends=[MeSHDbi]; };
+  MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.11.0"; sha256="0jdxvnhxrajhd5dr6hzfii7b1n6x874qfc8999pw8y8rwh8c4ln7"; depends=[MeSHDbi]; };
+  MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.11.0"; sha256="0vqyanf9n9ji77zkck3vyrrhm87hx3yxiy9fpwal6a0vh31vrjb9"; depends=[MeSHDbi]; };
+  MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.11.0"; sha256="11f9jibxf0amhixhs2pvmx6ir1530qkm9xcjrj09hwyx687bs3z8"; depends=[MeSHDbi]; };
+  MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.11.0"; sha256="03nbmbnbfvpja1p9rnqy1mpamlab0fd2y4fkx456jmnl87m1zk0n"; depends=[MeSHDbi]; };
+  MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.11.0"; sha256="0pd9gigwrckz9drh3x7n9nvvcq2q2wwmczkhhkqlpp4qhg85yp7g"; depends=[MeSHDbi]; };
+  MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.11.0"; sha256="1rjb9ldrn2jg73p2j9mjn61ljw83bhr07yq7482lp4mglhwvqibm"; depends=[MeSHDbi]; };
+  MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.11.0"; sha256="14ywqllqgynwfxyxrkw2d6r7m2n82znx9s15l62d7jb88pvaajn6"; depends=[MeSHDbi]; };
+  MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.11.0"; sha256="0b5b5dyh99gykdp3whdz7rjz1862p3w4jigy7s1bjmhv4pm3bn2d"; depends=[MeSHDbi]; };
+  MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.11.0"; sha256="1cbwqyb4ja10j0250lggbpxgpivf0xj1m7hn4l687rdidxgrmy4s"; depends=[MeSHDbi]; };
+  MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.11.0"; sha256="0b5q8yclcx18f8aq45ikv7qyw0xfsksjf1fbl6fprflvzfz2cnir"; depends=[MeSHDbi]; };
+  MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.11.0"; sha256="1rd90rzipaa480sahh7pqlv1qzj1wcx543gkshj6mcfkr6r08zci"; depends=[MeSHDbi]; };
+  MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.11.0"; sha256="0xg2mi60qlg76g1zxmybcixci8nivw4ld91qxf13jybcr0mwf9xn"; depends=[MeSHDbi]; };
+  MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.11.0"; sha256="0l80s6v7p2n7p17chbk6a7y5y2b02z38x034jwg3yvyfqy073r11"; depends=[MeSHDbi]; };
+  MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.11.0"; sha256="187zq75qz7jysz8jg5k5sgvxkrpvdyyi8xlsidi774nyb7z5d96l"; depends=[MeSHDbi]; };
+  MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.11.0"; sha256="1aicyzgw5nx6z9q339cd1iabi7a1yjswla0j94anqwh783lqrpxq"; depends=[MeSHDbi]; };
+  MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.11.0"; sha256="03rvcxawyhckg693w2ngnk3sljgz7idha6iqyax8p8wagl2h5ipv"; depends=[MeSHDbi]; };
+  MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.11.0"; sha256="17d3ankadjsvddfqxqm3hnqcmsr2rknkbvraq6zpdl7xw3r21yfn"; depends=[MeSHDbi]; };
+  MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.11.0"; sha256="1j3wsmspg7w30y04l173pihac9xg633w8zj2scz6jnph6rgxw3p1"; depends=[MeSHDbi]; };
+  MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.11.0"; sha256="0640jfik9qp15h5180rn1afd2kv2wh5s0nbv2zjiz6089csb2fnf"; depends=[MeSHDbi]; };
+  MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.11.0"; sha256="1y058sma4p48fj5f8v2i79nak5892pkk7rmr3i18jv44c8246zzl"; depends=[MeSHDbi]; };
+  MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.11.0"; sha256="03dybrs5zhnil83jp37hq4rh8ybvyjnqpkr2vwa7f1kd65mq33za"; depends=[MeSHDbi]; };
+  MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.11.0"; sha256="032kjhsm39jck9gxlg15g4x6n4r2iyi339vm6b9v4xcays45h9hi"; depends=[MeSHDbi]; };
+  MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.11.0"; sha256="0h60gqkc4cjkbqs8i3x6z774qq4ihp20bssi70wli6fvsiysgbly"; depends=[MeSHDbi]; };
+  MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.11.0"; sha256="1c8rg4h6gcs4y5gxz1z66a0ma3xpg4sdp6zwzcyrq02r2vjwj6ls"; depends=[MeSHDbi]; };
+  MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.11.0"; sha256="03aycm5222wkx6rh7x204rkcxnh6amghm2zpzqiy4c5a2a871y9d"; depends=[MeSHDbi]; };
+  MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.11.0"; sha256="0qqwwa3hk8ds2nv7xndqx4z9s00524sqrpgxh690yhdczn1ridqd"; depends=[MeSHDbi]; };
+  MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.11.0"; sha256="1v47a80lvhhbl7sqx881nx1m4pqi6mprmgd03cvk4vhrgv74ji8f"; depends=[MeSHDbi]; };
+  MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.11.0"; sha256="0mpabfvji1y1irgm5wkbinabriwbbb6wg6a0rc4mq5vn6j8nia36"; depends=[MeSHDbi]; };
+  MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.11.0"; sha256="1sb0b82ibvk2n22a88c7qkmb3wch6zcgaah54p920dih2xxx24nb"; depends=[MeSHDbi]; };
+  MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.11.0"; sha256="1i65691h3w34kvqswfkg6klpj8gm39p6csa8da4hlbwc7q58zzpf"; depends=[MeSHDbi]; };
+  MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.11.0"; sha256="12yrsy71g0r6w028i56kxknkb4gr34x4d6064m61023234j31j69"; depends=[MeSHDbi]; };
+  MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.11.0"; sha256="19ihdqwlrifd6nyi1bbxnjbq7qqb535d47mm5h0f1pz2h6w6jps6"; depends=[MeSHDbi]; };
+  MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.11.0"; sha256="1f2f9vqdaqi6iak6yg3rcgcpvhaz76zl4hywnlz1gi7aszxiff0k"; depends=[MeSHDbi]; };
+  MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.11.0"; sha256="075hhjahc34bznvmqrlc6vnlq25c4ybsyd6ry5qmnzccpxyqhgv8"; depends=[MeSHDbi]; };
+  MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.11.0"; sha256="0c7kb73jrr74a05jgyf903bvy92pn23aklflnl2cqqwxqjc6f9hm"; depends=[MeSHDbi]; };
+  MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.11.0"; sha256="1zg7c08z6j02sg74ff1q3hnmy5bszd6g5dyr0hxxqivx28bmirya"; depends=[MeSHDbi]; };
+  MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.11.0"; sha256="1p70v5bvhawsh954mmnxiy734n0z6b0mfl4j3i2g3jijwrds9f6v"; depends=[MeSHDbi]; };
+  MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.11.0"; sha256="0997k7iwq49sf2fn88lgx5j3rhsv9g7mldsm2bpsqmw52d8j568f"; depends=[MeSHDbi]; };
+  MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.11.0"; sha256="16pxwy7yycdp59j3nvz58jc8h2y251b4prpk4nn589z7pk37hw52"; depends=[MeSHDbi]; };
+  MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.11.0"; sha256="0dmdfi983i2sf56b06p7q1w7n8ik3j1dkfw1x1cc207wmmns4916"; depends=[MeSHDbi]; };
+  MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.11.0"; sha256="024076n31mpz2fr7dbf5di6gxn1w1gajx95065vl4555zx46i9n1"; depends=[MeSHDbi]; };
+  MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.11.0"; sha256="0rbnysb12i2f1a9xz0869m5n031j60c8bxnj1cp0zxlnylamf7w0"; depends=[MeSHDbi]; };
+  MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.11.0"; sha256="1h9jz00bgz54nknl95jf60qqgmn5iyq766sdkxn7r54h9315c9g9"; depends=[MeSHDbi]; };
+  MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.11.0"; sha256="1b4nhix3ky4d0cm8hix9m7chcgdyskvd0h7fj3k13a4zxyxvfw9x"; depends=[MeSHDbi]; };
+  MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.11.0"; sha256="16fcswjrv056g5d6ikf2g8af470djf02pyxhp5ib6gk932vl7kp0"; depends=[MeSHDbi]; };
+  MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.11.0"; sha256="08cdkyvwss0cczd6j19j02950jpqhhzi79y9swqnzzh3nydb3aqj"; depends=[MeSHDbi]; };
+  MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.11.0"; sha256="09nigd6hc3iy3s2r70ixfyj04la8cnaxhvr5i1k0adapjgf4q1mx"; depends=[MeSHDbi]; };
+  MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.11.0"; sha256="1cwhbrpiznkfbkxchpddkr68jzcxzn0mvn8cy81dm0vj4x8dxjb8"; depends=[MeSHDbi]; };
+  MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.11.0"; sha256="0psaqhdi4hicy5vkngkh7ig5ndsjl768n9fg36zlvqllww58kfis"; depends=[MeSHDbi]; };
+  MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.11.0"; sha256="0jdwxkwinbnvap0mpirzcd4zgfvhsmca2r57s2lzh2i1x24hxa4c"; depends=[MeSHDbi]; };
+  MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.11.0"; sha256="16qcm0d8m53dkwfbcsygbm3xj7x6hblwpa4agds5vnlkb26m48qn"; depends=[MeSHDbi]; };
+  MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.11.0"; sha256="1w3zqynqjv79ixxnmn3khvj3p6586nq48dx00rap6vzirmhzigqv"; depends=[MeSHDbi]; };
+  MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.11.0"; sha256="0ryxhk5g07fpnnk72q5a2847k6w509956fcxnrvwvp7f98p3z50x"; depends=[MeSHDbi]; };
+  MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.11.0"; sha256="0i1772rpq95ppzxa809ms1r65d9rk5vqhcl36ndjs2lhzdydw8fz"; depends=[MeSHDbi]; };
+  MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.11.0"; sha256="0xgi89vzhxkmqx0y84i58jkxikksqdi64r82p59ir6l1anpyvvc9"; depends=[MeSHDbi]; };
+  MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.11.0"; sha256="0g0fnackq1yjaw0b3ppzbcj0sfx288wm6cv57ly69svfg1n0wlk5"; depends=[MeSHDbi]; };
+  MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.11.0"; sha256="1z29d19is5lq8rqrkk1dyifgn0v2i68pbw8i7dlwnnicj2sfpynb"; depends=[MeSHDbi]; };
+  MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.11.0"; sha256="0dcxjlpc9diz1lvrkpbrab5zjz96r837x7ij9786966a3x458xk0"; depends=[MeSHDbi]; };
+  MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.11.0"; sha256="0gpj4i2mls1qkyivxy2gk3b8w9vkxnwf2b0cpmbv5bvpjcsbw47i"; depends=[MeSHDbi]; };
+  MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.11.0"; sha256="14knm1h8mp5qfjbny2wwkj772x72laxgymhsa04m78mb38qhypwq"; depends=[MeSHDbi]; };
+  MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.11.0"; sha256="0hwgkq669g99yrkbpk3pjpxbz7q0vwvkcx3rrvdk9dnjinlbcn54"; depends=[MeSHDbi]; };
+  MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.11.0"; sha256="1mz986apgfd6sn62wws948yi46r87fzaszxnv450fgc42l23l0jx"; depends=[MeSHDbi]; };
+  MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.11.0"; sha256="0dvz5xbx6vdmqibpq8xmpdjfvvqw7iqq3w4d350sxj5kaw2afp5s"; depends=[MeSHDbi]; };
+  MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.11.0"; sha256="08hyvaqsvdpcizsqr53ab6bfh1fnlsj8d62pq03lpgr96rlyqi8q"; depends=[MeSHDbi]; };
+  MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.11.0"; sha256="0mid3qmv7kxc7kn69vbhgchvrbv4fig97nw9zxsbd0rj66abzas2"; depends=[MeSHDbi]; };
+  MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.11.0"; sha256="1pwq58mm7ripnzxcn13k1y157pjasrv30xxmrrqb4rv55nk61vbf"; depends=[MeSHDbi]; };
+  MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.11.0"; sha256="0qd75lkyrs864sy3sci3bablipn9gabk24wbriis9bi0qf7hccv5"; depends=[MeSHDbi]; };
+  MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.11.0"; sha256="0djsx876h0xz0h8jhs6yad8iqqjlr72b0fxasqgh89zpfp2hkvwd"; depends=[MeSHDbi]; };
+  MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.11.0"; sha256="08b92lhq2gbvbm7y0q4zc991wi1fjhm68n03b782h2g6syczmlma"; depends=[MeSHDbi]; };
+  MeSH_db = derive2 { name="MeSH.db"; version="1.11.0"; sha256="1l6hynwmhb8p666q8n9dnvd0nhjy1f9nz2jg3z2p13dc5jl6syiw"; depends=[MeSHDbi]; };
   MmAgilentDesign026655_db = derive2 { name="MmAgilentDesign026655.db"; version="3.2.3"; sha256="00d0yjcb5id7zacx4bzdwy4q6f4qvnnx8ph4d4xz1fmcbspz2qiz"; depends=[AnnotationDbi org_Mm_eg_db]; };
   MoExExonProbesetLocation = derive2 { name="MoExExonProbesetLocation"; version="1.15.0"; sha256="0bvj3bji4bwwmxjz4b57n1aqypdibdmry30rfwmlxss1hav96sl7"; depends=[AnnotationDbi]; };
   Mu15v1_db = derive2 { name="Mu15v1.db"; version="3.2.3"; sha256="0qchqkbx6ybijab8qhflxj33kwksfll1d3d3917vydjac9fzw1lz"; depends=[AnnotationDbi org_Mm_eg_db]; };
@@ -236,7 +257,7 @@ in with self; {
   Norway981_db = derive2 { name="Norway981.db"; version="3.2.3"; sha256="04ngc2hilqi9m7933mnm7jcvkxlz68vqqh5b628db575vcxql9b9"; depends=[AnnotationDbi org_Hs_eg_db]; };
   OperonHumanV3_db = derive2 { name="OperonHumanV3.db"; version="3.2.3"; sha256="082gff88cwk2p50q8g9bixggacaclgqcvk6w5dc11h9fkgvd160i"; depends=[AnnotationDbi org_Hs_eg_db]; };
   PANTHER_db = derive2 { name="PANTHER.db"; version="1.0.4"; sha256="1vl8anixkhcb9axlszk479yaw48bz1hhgmff41nqk8k8w4jkyn1y"; depends=[AnnotationDbi RSQLite]; };
-  PFAM_db = derive2 { name="PFAM.db"; version="3.6.0"; sha256="1zlrwps1kwl2h0cmvh0qqmn93n2md6yrkm47nz2vy080dry0q0ix"; depends=[AnnotationDbi]; };
+  PFAM_db = derive2 { name="PFAM.db"; version="3.7.0"; sha256="0ih3xz8vk80xzqwgv6ff3rp1a24qhwd1v1frkq1m6d981g7ymdap"; depends=[AnnotationDbi]; };
   POCRCannotation_db = derive2 { name="POCRCannotation.db"; version="3.2.3"; sha256="0ybvs4hrxpivdkhm0fxpib11vlxqqdk8prlyj78vj5qzyb3iy89d"; depends=[AnnotationDbi org_Hs_eg_db]; };
   PartheenMetaData_db = derive2 { name="PartheenMetaData.db"; version="3.2.3"; sha256="0d37c5b7s3fgkkvg7sj7gl9ksrjk5pyyv54vkys8w3qwgsm8yrdz"; depends=[AnnotationDbi org_Hs_eg_db]; };
   PolyPhen_Hsapiens_dbSNP131 = derive2 { name="PolyPhen.Hsapiens.dbSNP131"; version="1.0.2"; sha256="1kikygkli41sn3rqihz0924prmqg2264ifj29vmg1a7qccm0kf7c"; depends=[AnnotationDbi RSQLite VariantAnnotation]; };
@@ -257,38 +278,39 @@ in with self; {
   SNPlocs_Hsapiens_dbSNP144_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP144.GRCh38"; version="0.99.20"; sha256="0yxmsnxncr7w30r0d7bg5i96pclm2vf40p9jdqa02rc67a6sximn"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
   SNPlocs_Hsapiens_dbSNP149_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP149.GRCh38"; version="0.99.20"; sha256="17bv25p1261hn9d7mxfp6pvivj15pxyvr92gms8a8msfqg9y0xkb"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
   SNPlocs_Hsapiens_dbSNP150_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP150.GRCh38"; version="0.99.20"; sha256="0jkwwgxxpm9ry8kizq8hs70sky41pks1ag40y5aqq91yjbpqlckj"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
+  SNPlocs_Hsapiens_dbSNP151_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP151.GRCh38"; version="0.99.20"; sha256="19mmzlg76hh0imrqf135kcbwxkmm403gj9y7wk6ij9k12afr9kfz"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
   TxDb_Athaliana_BioMart_plantsmart22 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart22"; version="3.0.1"; sha256="0j2zr4cddad7z1lxx9m9kfgyy7jajjnblpk9j8igd39ia3ixrpzc"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Athaliana_BioMart_plantsmart25 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart25"; version="3.1.3"; sha256="0a6v0l6p13zmiysi3k8dxzdlxng552qqj9rnlbdavdiidla0pvm3"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Athaliana_BioMart_plantsmart28 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart28"; version="3.2.2"; sha256="1yjyvrbx55y024lqg3b2rlf8pngqw5xi3p83j5ipan05wf0aq6ir"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.4.3"; sha256="1i4r6gmw2kv67hiwc5k2f0jzh87nx2l8q8ksxqy9hdn1q5wpsrxl"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Celegans_UCSC_ce11_refGene = derive2 { name="TxDb.Celegans.UCSC.ce11.refGene"; version="3.4.3"; sha256="1q68ds8j7m4a1sagn1ypc6p7qqdkdvmhjg7z57ksdl3w4rhkk1w9"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.4.4"; sha256="18gmx57savyvvdkgnrvmc4xj3xrakybyx4pkfmpabnqy29z6n71q"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Celegans_UCSC_ce11_refGene = derive2 { name="TxDb.Celegans.UCSC.ce11.refGene"; version="3.4.4"; sha256="04jcx40z2380x760wbl686zvm780y38kls1js215jhmw7hff8md5"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Celegans_UCSC_ce6_ensGene = derive2 { name="TxDb.Celegans.UCSC.ce6.ensGene"; version="3.2.2"; sha256="1sgppva33cdy4isj2is8mfalj5gmmkpbkq9w1d83a4agcq31mi90"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Cfamiliaris_UCSC_canFam3_refGene = derive2 { name="TxDb.Cfamiliaris.UCSC.canFam3.refGene"; version="3.4.3"; sha256="1yh4cp509rfw5xj0la49gyxy26l8fasap7dhianhhfnsdqkayzrs"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Cfamiliaris_UCSC_canFam3_refGene = derive2 { name="TxDb.Cfamiliaris.UCSC.canFam3.refGene"; version="3.4.4"; sha256="1rl7yc2csc3fs2iri0kkvpjv34jnhkzc0jhh2a3hnyvhv55lzmf0"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Dmelanogaster_UCSC_dm3_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm3.ensGene"; version="3.2.2"; sha256="1337x23rdmiiza83ms225kri37h16q5hw1lw0m577abcgip3d7c7"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.4.1"; sha256="0sdw0gbk84lfjmiyy2x4q01zh1vbjq3vfziwxkb4h0v6nab63k01"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Drerio_UCSC_danRer10_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer10.refGene"; version="3.4.3"; sha256="03awii2bq91glqwklr0m48p6qlxq4rij39ncq2f6sbzw5iqqjjbr"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.4.3"; sha256="1a17401a8lfkv7acxxsh02yrmrmw7mj3207jgrcxjmbd6sicymy8"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Ggallus_UCSC_galGal5_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal5.refGene"; version="3.4.3"; sha256="124hdrj3n77pw7jkxfga8b4flp5xlzynn50fpfjh163jkdb6r9ij"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.4.4"; sha256="18nwjnkbrvrkk6g5jns3h55874hk92fdbrfyjvvxk4daw0p7gii8"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Drerio_UCSC_danRer10_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer10.refGene"; version="3.4.4"; sha256="1ck4ymlxj0fjrbgxzgdqgbyl3z4nqyc6bczw1cgwblmcv52h3cj0"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.4.4"; sha256="1cxdrdg3pqwi0rfk5bzik05r1hvxwsva862b7cf7pfcf202dkqg5"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Ggallus_UCSC_galGal5_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal5.refGene"; version="3.4.4"; sha256="15laq4kdm85755lk176lqsi2aryi9i85b4c1arrj4qgjkjrbylvq"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Hsapiens_BioMart_igis = derive2 { name="TxDb.Hsapiens.BioMart.igis"; version="2.3.2"; sha256="0590a2hkrpm33hmjg5g0gm6sig3xvc09m0q6lwmafgaajf90h6ky"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Hsapiens_UCSC_hg18_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg18.knownGene"; version="3.2.2"; sha256="1yk9ggclkqqfzrdp8gcqyplvif824pa7df54ck5gb1xb9q5s975w"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Hsapiens_UCSC_hg19_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg19.knownGene"; version="3.2.2"; sha256="1sajhcqqwazgz2lqbik7rd935i7kpnh08zxbp2ra10j72yqy4g86"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Hsapiens_UCSC_hg19_lincRNAsTranscripts = derive2 { name="TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts"; version="3.2.2"; sha256="0bmbp7kydvviczw8axgxq2wdlwq6fdas90jk9bg56avjq5syws2g"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Hsapiens_UCSC_hg38_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg38.knownGene"; version="3.4.0"; sha256="0i0xw0mcn403r911ijqdnrwg9k5bspdnjibfjvnhxq4h8vcfprn5"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.4.3"; sha256="0g14rkxk44bzrhgl5xyfdb8lpq7m5iv95yk92inljz02qxinp9j4"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.4.3"; sha256="16cmwrij91hj10q3alcxpv0qrfah25z5x23m7lmzrgchsjd84rmw"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.4.4"; sha256="13nv7l71piwf0frnwplwbac82ad7vxbw31yrfnqvnd1knh7ns99x"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.4.4"; sha256="1qgm66hnhqb3jyal8s43yri96k1xwb3vamb83894n86bh2g6nlca"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Mmusculus_UCSC_mm10_ensGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.ensGene"; version="3.4.0"; sha256="0saxi1fdiwd38sfvy1rynd3v44rbp158jv6sjqcivvaqnd84zg9s"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Mmusculus_UCSC_mm10_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.knownGene"; version="3.4.0"; sha256="08gava9wsvpcqz51k2sni3pj03n5155v32d9riqbf305nbirqbkb"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Mmusc