Merge pull request #108249 from prusnak/bowtie

bowtie: init at at 1.3.0

1 files changed, 25 insertions, 0 deletions

diff --git a/pkgs/applications/science/biology/bowtie/default.nix b/pkgs/applications/science/biology/bowtie/default.nix
new file mode 100644
index 000000000000..964eeddb461d
--- /dev/null
+++ b/pkgs/applications/science/biology/bowtie/default.nix
@@ -0,0 +1,25 @@
+{ stdenv, fetchFromGitHub, zlib }:
+
+stdenv.mkDerivation rec {
+  pname = "bowtie";
+  version = "1.3.0";
+
+  src = fetchFromGitHub {
+    owner = "BenLangmead";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "0da2kzyfsn6xv8mlqsv2vv7k8g0c9d2vgqzq8yqk888yljdzcrjp";
+  };
+
+  buildInputs = [ zlib ];
+
+  installFlags = [ "prefix=$(out)" ];
+
+  meta = with stdenv.lib; {
+    description = "An ultrafast memory-efficient short read aligner";
+    license = licenses.artistic2;
+    homepage = "http://bowtie-bio.sf.net/bowtie";
+    maintainers = with maintainers; [ prusnak ];
+    platforms = platforms.all;
+  };
+}