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2023-01-13DBENGINE v2 - improvements 2 (#14257)Costa Tsaousis
* allow extents to be merged for as long as possible * do not block the event loop while recalculating retention due to datafile rotation * buffers are incrementally cleaned up, every second, by just 1 entry * fix order of commands * remove newline * measure cancelled extent read requests * count all cancelled extent requests * do not double count failed pages * fixed cancelled name * Fix error and warnings when compiling with --disable-dbengine * when the timeframe is outside retention and whole query should fail * do not mark as failed pages that have been loaded but have been skipped * added chart to show cache memory calculation variables * LONG_MAX for 32-bit compatibility * fix cache size calculation on 32-bit * fix cache size calculation on 32-bit - use unsinged long long * fix compilation warnings on 32-bits * fix another compilation warning on 32-bits * fix compilation warnings on older 32-bit compilers * fix compilation warnings on older 32-bit compilers - more of them * disable ML threads joining Co-authored-by: Stelios Fragkakis <52996999+stelfrag@users.noreply.github.com>
2022-11-20streaming compression, query planner and replication fixes (#14023)Costa Tsaousis
* streaming compression, query planner and replication fixes * remove journal v2 stats from global statistics * disable sql for checking past sql UUIDs * single threaded replication * final replication thread using dictionaries and JudyL for sorting the pending requests * do not timeout the sending socket when there are pending replication requests * streaming receiver using read() instead of fread() * remove FILE * from streaming - now using posix read() and write() * increase timeouts to 10 minutes * apply sender timeout only when there are metrics that are supposed to be streamed * error handling in replication * remove retries on socket read timeout; better error messages * take into account inbound traffic too to detect that a connection is stale * remove race conditions from replication thread * make sure deleted entries are marked as executed, so that even if deletion fails, they will not be executed * 2 minutes timeout to retry streaming to a parent that already has this node * remove unecessary condition check * fix compilation warnings * include judy in replication * wrappers to handle retries for SSL_read and SSL_write * compressed bytes read monitoring * recursive locks on replication to make it faster during flush or cleanup * replication completion chart at the receiver side * simplified recursive mutex * simplified recursive mutex again
2022-11-15Revert "New journal disk based indexing for agent memory reduction" (#14000)Costa Tsaousis
Revert "New journal disk based indexing for agent memory reduction (#13885)" This reverts commit 224b051a2b2bab39a4b536e531ab9ca590bf31bb.
2022-11-15New journal disk based indexing for agent memory reduction (#13885)Stelios Fragkakis
* Add read only option to netdata_mmap so files are accessed ousing PROT_READ * Initial functions to write the new journal file and switch to the new indexing * Cleanup code, add parameters to pg_cache_punch_hole to avoid updating page latets oldest times pg_cache insert to have parameter if page index locked needs to be done Page eviction functions will try to deallocate the descriptor as well (pg_cache_punch_hole without page_index time updates) Cleanup messages during startup * Cleanup messages during startup * Disbale extent caching for now, add placeholder for journal indexing and activation while the agent is running * Add main function to populate descriptors by checking the new journal indexing * prevent crash * fix for binary search crash * Avoid Time-of-check time-of-use filesystem race condition * always add a page * populate fixes - it is still incomplete * pg_cache_insert returns the descriptor that ends up in the page_index * Add populate next (Fix 1) * Fix compilation warnings, reactivate extent caching * Add populate next (Fix 2) * Add populate next (Fix 3) switch to the next entry or journal file when asking to populate descriptor with next * Fix resource leak and wrong sizeof * Rework page population (part 1) * Additional checksums added / journal validation * Cleanup (part 1) * Locking added and Cleanup (part 2) * Close journal file after new journal index activation * Skip warning when compiling without NETDATA_INTERNAL_CHECKS * Ignore empty index file (header and trailer and no metrics) * Try to remove all evicted descriptors (may prevent slight memory increase) * Evict pages also when we succesfully do try_reserve * Precache pages and cleanup * Add a separate cleanup thread to release unused descriptors * Check existence of key correctly * Fix total file size calculation * Statistics for journal descriptors * Track and release jourval v2 descriptors * Do not try to allocate pages for locality if under pressure * Do not track v2 descriptors when populating the page_index * Track page descriptors as they are inserted in the page index (per journal file) Scan journal files for pending items to cleanup Cleanup v2 descriptors only if they are not populated Check before adding to page cache to avoid memory allocation /free * Close journal file that has been processed and migrated to the new index Check for valid file before trying to truncate / close. This file has been closed during startup * Better calculation for the number of prefetched data pages based on the query end time Code cleanup and comments Add v2 populated descriptor expiration based on journal access time * Code cleanup * Faster indexing Better journal validation (more sanity checks) Detect new datafile/ journal creation and trigger index generation Switch to the new index / mark descriptors in memory as needed Update journal access time when a descriptor is returned Code cleanup (part 1) * Re activate descriptor clean Code cleanup * Allow locality precaching * Allow locality precaching for the same page alignment * Descriptor cleanup internal changed * Disable locality precaching * Precache only if not under pressure / internal cleanup at 60 seconds * Remove unused functions * Migrate on startup always Make sure the metric uuid is valid (we have a page_index) Prevent crash if no datafile is available when logging an error Remove unused functions * New warn limit for precaching Stress test v2 descriptor cleanup - Every 1s cleanup if it doesnt exist in cache - 60s cache eviction * Arrayalloc internal checks on free activated with NETDATA_ARRAYALLOC_INTERNAL_CHECKS Ability to add DESCRIPTOR_EXPIRATION_TIME and DESCRIPTOR_INTERVAL_CLEANUP during compile Defaults DESCRIPTOR_INTERVAL_CLEANUP = 60 and DESCRIPTOR_EXPIRATION_TIME = 600 * Lookup page index correctly * Calculate index time once * Detect a duplicate page when doing cache insert and during flushing of pages * Better logging * Descriptor validation (extent vs page index) when building an index file while the agent is running * Mark invalid entries in the journal v2 file * Schedule an index rebuild if a descriptor is found without an extent in the timerange we are processing Release descriptor lock to prevent random shutdown locks * Proper unlock * Skip descriptor cleanup when journal file v2 migration is running * Fix page cache statistics Remove multiple entries of the page_index from the page cache Cleanup * Adjust preload pages on pg_cache_next. Handle invalid descriptor properly Unlock properly * Better handling of invalid pages Journal indexing during runtime will scan all files to find potential ones to index * Reactivate migration on startup Evict descriptors to cause migration Don't count the entries in page index (calculate when processing the extent list) Check for valid extent since we may set the extent to NULL on startup if it is invalid Better structure init Address valgrind issues * Add don't fork/dump option * Add separate lock to protect accessing a datafile's extent list Comment out some unused code (for now) Abort descriptor cleanup if we are force flushing pages (page cache under pressure) * Check for index and schedule when data flush completes Configure max datafile size during compilation Keep a separate JudyL array for descriptors Skip quota test if we are deleting descriptors or explicitly flushing pages under pressure * Fix * set function when waiters are waken up * add the line number to trace the deadlock * add thread id * add wait list * init to zero * disable thread cancelability inside dbengine rrdeng_load_page_next() * make sure the owner is the thread * disable thread cancelability for replication as a whole * Check and queue indexing after first page flush * Queue indexing after a small delay to allow some time for page flushing * tracing of waiters only when compiled with internal checks * Mark descr with extent_entry * Return page timeout * Check if a journalfile is ready to be indexed Migrate the descriptors or evict if possible Compilation warning fix * Use page index if indexing during startup Mark if journalfile should be checked depending on whether we can migrate or delete a page during indexing * require 3x max message size as sender buffer * fix for the msg of the adaptive buffer size * fix for the msg of the duplicate replication commands * Disable descriptor deletion during migration * Detect descriptor with same start page time * sender sorts replication requests before fullfilling them; receiver does not send duplicate replication requests * dbengine never allows past timestamps to be collected * do not accept values same as last data point stored in dbengine * replicate non-overlapping ranges * a better replication logic to avoid sending overlapping data to parents * Do not start journal migration in parallel * Always update page index times * Fix page index first / last times on load * internal log when replication responses do not match the requests or when replication commands are sent while there are others inflight * do not log out of bounds RBEGIN if it is the last replication command we sent * better checking of past data collection points * better checking of past data collection points - optimized * fix corruption during decompression of streaming * Add config to disable journal indexing Add config parameter for detailed journal integrity check (Metric chain validation check during startup) pg cache insert drop check for existing page Fix crc calculation for metric headers * children disable compression globally, only when the compression gives an error * turn boolean member into RRDHOST OPTION * Compilation warnings * Remove unused code * replication sender statistics * replication sender statistics set to 100% when no replication requests are pending * Fix casting warning Co-authored-by: Costa Tsaousis <costa@netdata.cloud>
2022-10-05Allow netdata plugins to expose functions for querying more information ↵Costa Tsaousis
about specific charts (#13720) * function renames and code cleanup in popen.c; no actual code changes * netdata popen() now opens both child process stdin and stdout and returns FILE * for both * pass both input and output to parser structures * updated rrdset to call custom functions * RRDSET FUNCTION leading calls for both sync and async operation * put RRDSET functions to a separate file * added format and timeout at function definition * support for synchronous (internal plugins) and asynchronous (external plugins and children) functions * /api/v1/function endpoint * functions are now attached to the host and there is a dictionary view per chart * functions implemented at plugins.d * remove the defer until keyword hook from plugins.d when it is done * stream sender implementation of functions * sanitization of all functions so that certain characters are only allowed * strictier sanitization * common max size * 1st working plugins.d example * always init inflight dictionary * properly destroy dictionaries to avoid parallel insertion of items * add more debugging on disconnection reasons * add more debugging on disconnection reasons again * streaming receiver respects newlines * dont use the same fp for both streaming receive and send * dont free dbengine memory with internal checks * make sender proceed in the buffer * added timing info and garbage collection at plugins.d * added info about routing nodes * added info about routing nodes with delay * added more info about delays * added more info about delays again * signal sending thread to wake up * streaming version labeling and commented code to support capabilities * added functions to /api/v1/data, /api/v1/charts, /api/v1/chart, /api/v1/info * redirect top output to stdout * address coverity findings * fix resource leaks of popen * log attempts to connect to individual destinations * better messages * properly parse destinations * try to find a function from the most matching to the least matching * log added streaming destinations * rotate destinations bypassing a node in the middle that does not accept our connection * break the loops properly * use typedef to define callbacks * capabilities negotiation during streaming * functions exposed upstream based on capabilities; compression disabled per node persisting reconnects; always try to connect with all capabilities * restore functionality to lookup functions * better logging of capabilities * remove old versions from capabilities when a newer version is there * fix formatting * optimization for plugins.d rrdlabels to avoid creating and destructing dictionaries all the time * delayed health initialization for rrddim and rrdset * cleanup health initialization * fix for popen() not returning the right value * add health worker jobs for initializing rrdset and rrddim * added content type support for functions; apps.plugin permanent function to display all the processes * fixes for functions parameters parsing in apps.plugin * fix for process matching in apps.plugiin * first working function for apps.plugin * Dashboard ACL is disabled for functions; Function errors are all in JSON format * apps.plugin function processes returns json table * use json_escape_string() to escape message * fix formatting * apps.plugin exposes all its metrics to function processes * fix json formatting when filtering out some rows * reopen the internal pipe of rrdpush in case of errors * misplaced statement * do not use buffer->len * support for GLOBAL functions (functions that are not linked to a chart * added /api/v1/functions endpoint; removed format from the FUNCTIONS api; * swagger documentation about the new api end points * added plugins.d documentation about functions * never re-close a file * remove uncessesary ifdef * fixed issues identified by codacy * fix for null label value * make edit-config copy-and-paste friendly * Revert "make edit-config copy-and-paste friendly" This reverts commit 54500c0e0a97f65a0c66c4d34e966f6a9056698e. * reworked sender handshake to fix coverity findings * timeout is zero, for both send_timeout() and recv_timeout() * properly detect that parent closed the socket * support caching of function responses; limit function response to 10MB; added protection from malformed function responses * disabled excessive logging * added units to apps.plugin function processes and normalized all values to be human readable * shorter field names * fixed issues reported * fixed apps.plugin error response; tested that pluginsd can properly handle faulty responses * use double linked list macros for double linked list management * faster apps.plugin function printing by minimizing file operations * added memory percentage * fix compatibility issues with older compilers and FreeBSD * rrdpush sender code cleanup; rrhost structure cleanup from sender flags and variables; * fix letftover variable in ifdef * apps.plugin: do not call detach from the thread; exit immediately when input is broken * exclude AR charts from health * flush cleaner; prefer sender output * clarity * do not fill the cbuffer if not connected * fix * dont enabled host->sender if streaming is not enabled; send host label updates to parent; * functions are only available through ACLK * Prepared statement reports only in dev mode * fix AR chart detection * fix for streaming not being enabling itself * more cleanup of sender and receiver structures * moved read-only flags and configuration options to rrdhost->options * fixed merge with master * fix for incomplete rename * prevent service thread from working on charts that are being collected Co-authored-by: Stelios Fragkakis <52996999+stelfrag@users.noreply.github.com>
2022-09-26Fix warnings during compilation time on ARM (32 bits) (#13681)thiagoftsm
2022-09-05Deduplicate all netdata strings (#13570)Costa Tsaousis
* rrdfamily * rrddim * rrdset plugin and module names * rrdset units * rrdset type * rrdset family * rrdset title * rrdset title more * rrdset context * rrdcalctemplate context and removal of context hash from rrdset * strings statistics * rrdset name * rearranged members of rrdset * eliminate rrdset name hash; rrdcalc chart converted to STRING * rrdset id, eliminated rrdset hash * rrdcalc, alarm_entry, alert_config and some of rrdcalctemplate * rrdcalctemplate * rrdvar * eval_variable * rrddimvar and rrdsetvar * rrdhost hostname, os and tags * fix master commits * added thread cache; implemented string_dup without locks * faster thread cache * rrdset and rrddim now use dictionaries for indexing * rrdhost now uses dictionary * rrdfamily now uses DICTIONARY * rrdvar using dictionary instead of AVL * allocate the right size to rrdvar flag members * rrdhost remaining char * members to STRING * * better error handling on indexing * strings now use a read/write lock to allow parallel searches to the index * removed AVL support from dictionaries; implemented STRING with native Judy calls * string releases should be negative * only 31 bits are allowed for enum flags * proper locking on strings * string threading unittest and fixes * fix lgtm finding * fixed naming * stream chart/dimension definitions at the beginning of a streaming session * thread stack variable is undefined on thread cancel * rrdcontext garbage collect per host on startup * worker control in garbage collection * relaxed deletion of rrdmetrics * type checking on dictfe * netdata chart to monitor rrdcontext triggers * Group chart label updates * rrdcontext better handling of collected rrdsets * rrdpush incremental transmition of definitions should use as much buffer as possible * require 1MB per chart * empty the sender buffer before enabling metrics streaming * fill up to 50% of buffer * reset signaling metrics sending * use the shared variable for status * use separate host flag for enabling streaming of metrics * make sure the flag is clear * add logging for streaming * add logging for streaming on buffer overflow * circular_buffer proper sizing * removed obsolete logs * do not execute worker jobs if not necessary * better messages about compression disabling * proper use of flags and updating rrdset last access time every time the obsoletion flag is flipped * monitor stream sender used buffer ratio * Update exporting unit tests * no need to compare label value with strcmp * streaming send workers now monitor bandwidth * workers now use strings * streaming receiver monitors incoming bandwidth * parser shift of worker ids * minor fixes * Group chart label updates * Populate context with dimensions that have data * Fix chart id * better shift of parser worker ids * fix for streaming compression * properly count received bytes * ensure LZ4 compression ring buffer does not wrap prematurely * do not stream empty charts; do not process empty instances in rrdcontext * need_to_send_chart_definition() does not need an rrdset lock any more * rrdcontext objects are collected, after data have been written to the db * better logging of RRDCONTEXT transitions * always set all variables needed by the worker utilization charts * implemented double linked list for most objects; eliminated alarm indexes from rrdhost; and many more fixes * lockless strings design - string_dup() and string_freez() are totally lockless when they dont need to touch Judy - only Judy is protected with a read/write lock * STRING code re-organization for clarity * thread_cache improvements; double numbers precision on worker threads * STRING_ENTRY now shadown STRING, so no duplicate definition is required; string_length() renamed to string_strlen() to follow the paradigm of all other functions, STRING internal statistics are now only compiled with NETDATA_INTERNAL_CHECKS * rrdhost index by hostname now cleans up; aclk queries of archieved hosts do not index hosts * Add index to speed up database context searches * Removed last_updated optimization (was also buggy after latest merge with master) Co-authored-by: Stelios Fragkakis <52996999+stelfrag@users.noreply.github.com> Co-authored-by: Vladimir Kobal <vlad@prokk.net>
2022-04-01Fix memory leaks on Netdata exit (#12511)Vladimir Kobal
* Fix memory leaks in dimensions and charts * Initialize superblock memory regions * Clean up static threads * Fix memory leaks in compression * Fix memory leaks in rrdcaltemplate * Fix memory leaks in health config * Fix ACLK memory leaks
2022-03-24Stream compression - Deactivate compression at runtime in case of a ↵odynik
compressor buffer overflow (#12037) * [Stream compression] Downgrade stream version if compressor buffer overflows * [Stream compression] More user friendly compression messages * [Stream compression] Fix mutex starvation * [Stream compression] enable compression by default * Update streaming/README.md Co-authored-by: Tina Luedtke <kickoke@users.noreply.github.com>
2022-02-21Fix typos (#12183)Dimitris Apostolou
2022-01-28[Stream Compression] - Bug fix #12043 - lz4.h compilation error - compile ↵odynik
from source (#12049)
2022-01-19Add code for LZ4 streaming data compression (#11821)avstrakhov
* Add code for LZ4 streaming data compression * Fix LGTM alert * Add lz4 library for link when compression enabled * Add LZ4_resetStream_fast presence detection * Disable compression for older LZ4 libraries * Correct LZ4 API check * [Testing Stream Compression] Debug msgs and report.md * Add LZ4 library version using LZ4_initStream * Fixed bug in SSL mode * [Testing compression] - Add compression info messages * Set compression enabled by default, update doc * Update streaming/README.md Co-authored-by: DShreve2 <david@netdata.cloud> * [Agent Negotiation] Compression as separate capability * [Agent Negotiation] Compression as separate capability - default compression variable always active * Add code to negotiate compression * [Agent Negotiation] Based on stream version * [Agent Negotiation] Version based - fix compilation error * [Agent Negotiation] Fix glob var default_compression_enbaled=0 affects all the connections - Handle compression - stream version based * [Agent Negotiation - Compression] - Add control flag in 1. sender/receiver state & 2. stream.conf per child * [Agent Negotiation - Compression] Fix stream.conf key, mguid control * [Agent Negotiate Compression] Fine control on stream.conf per key,mguid for each child * [Agent Negotiation Compression] Stop destroying compressor for runtime configuration + Update Readme.md * [Agent Negotiation Compression] Use stream_version 4 if compression is disabled * Correct child's compression check * [Agent Negotiation Compression] Create streaming compression section in docs. * [Agent Negotiation Compresion] Remove redundant debug msgs * [Stream Compression] - integrate compression build info & config info in api/v1/info endpoint. * [Agent Negotiation] Finalize README.md * [Agent Stream Compression] Fix buildinfo json, Finalize readme.md * [Agent Stream Compression] Negotiate compression based on stream version * [Agent Stream Compression] Stream compression control per child in stream.conf | per AP_KEY, MACHINE_GUID * [Agent Stream Compression] Avoid destroying compressor enabling runtime configuration + Update Readme.md * [Agent Stream Compression] - Provide stream compression build info & config info in api/v1/info endpoint + Update Readme.md * [Agent Stream Compression] Fix rebase conflicts * [Agent Stream Compression] Fix more rebase conflicts * [Agent Stream Compression] 1. Stream version based negotiation 2. per child stream.conf control 3. finalize docs 4. stream compression build info in web api * [Agent Stream Compression] 1. Stream version based negotiation 2. per child stream.conf control 3. finalize docs 4. stream compression build info in web api * [Agent Stream Compression] Change unsuccessful buffer check to error * [Agent Stream Compression] Readme.md proof-read corrections, downgrade to stream_version_clabels, add shields for supported versions, EOF lint * [Agent Stream Compression] Fix missed lz4 library on Alpine Linux * Phrasal review Co-authored-by: odynik <odynik.ee@gmail.com> Co-authored-by: DShreve2 <david@netdata.cloud> Co-authored-by: Tina Lüdtke <tina@kickoke.com>